Data

Total RNA of mouse brain of E15.5

The University of Adelaide
Professor Hamish Scott (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM561991&rft.title=Total RNA of mouse brain of E15.5&rft.identifier=GSM561991&rft.publisher=The University of Adelaide&rft.description=A pregnant mouse was bred under a 12-hour light and 12-hour dark cycle with access to unlimited food and water. Embryos were removed after 15.5 days (E15.5) of pregnancy. The developing whole brain was dissected from one of the embryos for total RNA extraction. Total RNA was isolated from a whole brain dissected from an E15.5 embryo of C57BL/6 background using TRIzol reagent (Invitrogen) according to the manufacturer’s protocol. Small RNAs with sizes ranging from 16-30nt were isolated from 10μg total RNA using polyacrylamide gel electrophoresis. The complementary small RNA library was constructed using the Small RNA Sample Prep Kit version 1.0 (Illumina) according to the manufacturer's protocol with 5’-GTTCAGAGTT CTACAGTCCG ACGATC-3’ and 5’- TCGTATGCCG TCTTCTGCTT GT-3’ adapters at the 5’ and 3’ ends, respectively.&rft.creator=Professor Hamish Scott&rft.date=2013&rft.relation=doi:10.1186/1471-2164-12-176&rft_subject=Cancer Genetics&rft_subject=MEDICAL AND HEALTH SCIENCES&rft_subject=ONCOLOGY AND CARCINOGENESIS&rft.type=dataset&rft.language=English Access the data

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Data can be freely accessed at http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM561991

Dataset is copyright protected unless otherwise stated. Please refer the disclaimer on Gene Expression Omnibus’ website (http://www.ncbi.nlm.nih.gov/geo/info/disclaimer.html). For issues concerning intellectual property rights, please contact the manager for information.

Brief description

A pregnant mouse was bred under a 12-hour light and 12-hour dark cycle with access to unlimited food and water. Embryos were removed after 15.5 days (E15.5) of pregnancy. The developing whole brain was dissected from one of the embryos for total RNA extraction. Total RNA was isolated from a whole brain dissected from an E15.5 embryo of C57BL/6 background using TRIzol reagent (Invitrogen) according to the manufacturer’s protocol. Small RNAs with sizes ranging from 16-30nt were isolated from 10μg total RNA using polyacrylamide gel electrophoresis. The complementary small RNA library was constructed using the Small RNA Sample Prep Kit version 1.0 (Illumina) according to the manufacturer's protocol with 5’-GTTCAGAGTT CTACAGTCCG ACGATC-3’ and 5’- TCGTATGCCG TCTTCTGCTT GT-3’ adapters at the 5’ and 3’ ends, respectively.

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Identifiers
  • Local : GSM561991