Data

Skeletal muscle and blood RNA-seq counts in motor neurone disease cases and controls

The University of Queensland
Associate Professor Frederik Steyn (Aggregated by) Associate Professor Robert Henderson (Aggregated by) Associate Professor Robert Henderson (Aggregated by) Associate Professor Shyuan Ngo (Aggregated by) Associate Professor Shyuan Ngo (Aggregated by)
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a.mcrae@imb.uq.edu.au

Full description

Datasets of RNA-sequencing counts consisting of samples of both muscle and blood collected from motor neurone disease cases and healthy controls as recruited from the Royal Brisbane and Women's Hospital. This dataset consists of gene counts of merged and normalized technical replicates from DESeq2, using alignment and pseudo-alignment techniques from both STAR/Featurecounts as well as Salmon. Additionally, we include the covariates used in our analyses in phenotype files, as well as isoform-level counts as generated by SALMON on the muscle samples for differential transcript analyses.

Issued: 2023

Data time period: 13 02 2017 to 06 11 2018

This dataset is part of a larger collection

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133.77514,-25.2744

133.775136,-25.274398

Subjects
Biological Sciences | Biological Sciences | Bioinformatics and Computational Biology | Clinical Sciences | Genetics | Gene Expression (Incl. Microarray and Other Genome-Wide Approaches) | Gene Expression (Incl. Microarray and Other Genome-Wide Approaches) | Genetics | Genomics and Transcriptomics | Medical and Health Sciences | Medical Genetics (Excl. Cancer Genetics) | als | amyotrophic lateral sclerosis | eng | mnd | motor neurone disease | rna | rna-seq |

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local : UQ:289097

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