Data

The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals- OTU tables and metadata

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://apps.aims.gov.au/metadata/view/90287ada-10c5-4afc-a38f-330303c6d6ea&rft.title=The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals- OTU tables and metadata&rft.identifier=https://apps.aims.gov.au/metadata/view/90287ada-10c5-4afc-a38f-330303c6d6ea&rft.publisher=Australian Institute of Marine Science (AIMS)&rft.description=These data are generated for the paper “The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals”. See paper for details on data collection and interpretations. The datasets include the bacterial and Symbiodiniaceae OTU tables, metadata as well as phylogenetic tree generated in Qiime1 for statistical analyses using the R package phyloseq.Maintenance and Update Frequency: asNeededStatement: See paper for details on data collection and processing.&rft.creator=Australian Institute of Marine Science (AIMS) &rft.date=2025&rft.coverage=westlimit=147.05570983467626; southlimit=-19.250889837248096; eastlimit=147.05570983467626; northlimit=-19.250889837248096&rft.coverage=westlimit=147.05570983467626; southlimit=-19.250889837248096; eastlimit=147.05570983467626; northlimit=-19.250889837248096&rft_rights=Creative Commons Attribution 3.0 Australia License http://creativecommons.org/licenses/by/3.0/au/&rft_rights=Use Limitation: All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2018). The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals- OTU tables and metadata. https://apps.aims.gov.au/metadata/view/90287ada-10c5-4afc-a38f-330303c6d6ea, accessed[date-of-access].&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data
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Licence & Rights:

Open Licence view details
CC-BY

Creative Commons Attribution 3.0 Australia License
http://creativecommons.org/licenses/by/3.0/au/

Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2018). The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals- OTU tables and metadata. https://apps.aims.gov.au/metadata/view/90287ada-10c5-4afc-a38f-330303c6d6ea, accessed[date-of-access]".

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Brief description

These data are generated for the paper “The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals”. See paper for details on data collection and interpretations. The datasets include the bacterial and Symbiodiniaceae OTU tables, metadata as well as phylogenetic tree generated in Qiime1 for statistical analyses using the R package phyloseq.

Lineage

Maintenance and Update Frequency: asNeeded
Statement: See paper for details on data collection and processing.

Notes

Credit
Peplow, L.M (AIMS)
Credit
Chan, W.Y. Australian Institute of Marine Science, (AIMS) and School of BioSciences, University of Melbourne,
Credit
Menéndez, P. (AIMS) and School of Mathematics and Physics, University of Queensland
Credit
Hoffman, A.A. Bio21 Institute, University of Melbourne
Credit
van Oppen, M.J.H. (AIMS) and School of BioSciences, University of Melbourne

Modified: 23 06 2025

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147.05571,-19.25089

147.05570983468,-19.250889837248

text: westlimit=147.05570983467626; southlimit=-19.250889837248096; eastlimit=147.05570983467626; northlimit=-19.250889837248096

Subjects
oceans |

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Other Information
Symbiodiniaceae OTU Table

uri : https://api.aims.gov.au/data-v2.0/90287ada-10c5-4afc-a38f-330303c6d6ea/files/Symbiodiniaceae otuTable.biom

Symbiodiniaceae metadata

uri : https://api.aims.gov.au/data-v2.0/90287ada-10c5-4afc-a38f-330303c6d6ea/files/Symbiodiniaceae metadata.txt

Bacterial metadata

uri : https://api.aims.gov.au/data-v2.0/90287ada-10c5-4afc-a38f-330303c6d6ea/files/Bacterial metadata.txt

Bacterial OTU Table

uri : https://api.aims.gov.au/data-v2.0/90287ada-10c5-4afc-a38f-330303c6d6ea/files/Bacterial otuTable.biom

project Accession no.: PRJNA549088

uri : https://www.ncbi.nlm.nih.gov/nuccore/PRJNA549088

Chan WY, Peplow LM, Menendez P, Hoffmann AA, van Oppen MJH (2019) The roles of age, parentage and environment on bacterial and algal endosymbiont communities in Acropora corals. Molecular Ecology 28(16): 3830-3843

local : 11068/15297

ITS2 Symbiodiniaceae data sets

uri : https://www.ncbi.nlm.nih.gov/nuccore/SRR9317148

Raw sequences of the 16S bacterial

uri : https://www.ncbi.nlm.nih.gov/nuccore/SRR9308575

Raw sequences of the 16S bacterial

uri : https://www.ncbi.nlm.nih.gov/nuccore/SRR9308772

ITS2 Symbiodiniaceae data sets

uri : https://www.ncbi.nlm.nih.gov/nuccore/SRR9317344

Bacterial phylogenetic tree

uri : https://api.aims.gov.au/data-v2.0/90287ada-10c5-4afc-a38f-330303c6d6ea/files/Bacterial phylogenetic tree.tre

Identifiers
  • global : 90287ada-10c5-4afc-a38f-330303c6d6ea