Data

Symbiodinium diversity on the Great Barrier Reef (MTSRF Project 2.5i.3)

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://apps.aims.gov.au/metadata/view/0a519cbf-d286-4726-b0f8-6bd2eedd435d&rft.title=Symbiodinium diversity on the Great Barrier Reef (MTSRF Project 2.5i.3)&rft.identifier=https://apps.aims.gov.au/metadata/view/0a519cbf-d286-4726-b0f8-6bd2eedd435d&rft.publisher=Australian Institute of Marine Science (AIMS)&rft.description=Samples of S. flexibilis were collected from a total of 11 sites from inshore and offshore reefs within the Torres Strait, Cairns, Townsville and Whitsunday regions of the Great Barrier Reef between December 1998 and February 2000. The microsatellite alleles of Symbiodinium C (loci SymC_3-01, SymC_3-02,SymC_3-03 and SymC_3-04) were analysed for their genetic diversity using the variables inshore/offshore reefs; molecular variance pairwise estimates (FST) of genetic differentiation; and hierarchical cluster analysis of Euclidean distances of frequencies grouped using the UPGMA (Unweighted Pair Group with Arithmetic mean) algorithm. Site locations:Torres Straits (Dungeness); Cairns (Agincourt, Escape, Pickersgill and Undine Reefs); Townsville (Great Palm and Orpheus Islands, Rib and Trunk Reefs); Whitsunday (Hook and Deloraine Islands).Maintenance and Update Frequency: notPlanned&rft.creator=Australian Institute of Marine Science (AIMS) &rft.date=2024&rft.coverage=westlimit=142.91667; southlimit=-20.15833; eastlimit=149.06667; northlimit=-9.88333&rft.coverage=westlimit=142.91667; southlimit=-20.15833; eastlimit=149.06667; northlimit=-9.88333&rft_rights=Creative Commons Attribution-NonCommercial 3.0 Australia License http://creativecommons.org/licenses/by-nc/3.0/au/&rft_rights=Use Limitation: All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2010). Symbiodinium diversity on the Great Barrier Reef (MTSRF Project 2.5i.3). https://apps.aims.gov.au/metadata/view/0a519cbf-d286-4726-b0f8-6bd2eedd435d, accessed[date-of-access].&rft_rights=Resource Usage:Use of the AIMS data is for not-for-profit applications only. All other users shall seek permission for use by contacting AIMS. Acknowledgements as prescribed must be clearly set out in the user's formal communications or publications.Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassifiedMetadata Usage:Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassified&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data
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Creative Commons Attribution-NonCommercial 3.0 Australia License
http://creativecommons.org/licenses/by-nc/3.0/au/

Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2010). Symbiodinium diversity on the Great Barrier Reef (MTSRF Project 2.5i.3). https://apps.aims.gov.au/metadata/view/0a519cbf-d286-4726-b0f8-6bd2eedd435d, accessed[date-of-access]".

Resource Usage:Use of the AIMS data is for not-for-profit applications only. All other users shall seek permission for use by contacting AIMS. Acknowledgements as prescribed must be clearly set out in the user's formal communications or publications.Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassifiedMetadata Usage:Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassified

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Brief description

Samples of S. flexibilis were collected from a total of 11 sites from inshore and offshore reefs within the Torres Strait, Cairns, Townsville and Whitsunday regions of the Great Barrier Reef between December 1998 and February 2000. The microsatellite alleles of Symbiodinium C (loci SymC_3-01, SymC_3-02,SymC_3-03 and SymC_3-04) were analysed for their genetic diversity using the variables inshore/offshore reefs; molecular variance pairwise estimates (FST) of genetic differentiation; and hierarchical cluster analysis of Euclidean distances of frequencies grouped using the UPGMA (Unweighted Pair Group with Arithmetic mean) algorithm. Site locations:Torres Straits (Dungeness); Cairns (Agincourt, Escape, Pickersgill and Undine Reefs); Townsville (Great Palm and Orpheus Islands, Rib and Trunk Reefs); Whitsunday (Hook and Deloraine Islands).

Lineage

Maintenance and Update Frequency: notPlanned

Notes

Credit
van Oppen, Madeleine JH, Dr (Principal Investigator)

Modified: 17 10 2024

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149.06667,-9.88333 149.06667,-20.15833 142.91667,-20.15833 142.91667,-9.88333 149.06667,-9.88333

145.99167,-15.02083

text: westlimit=142.91667; southlimit=-20.15833; eastlimit=149.06667; northlimit=-9.88333

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oceans |

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Other Information
High genetic differentiation and cross-shelf patterns of genetic diversity among Great Barrier Reef populations of Symbiodinium: Howells E, van Oppen MJH and Willis BL (2009) High genetic differentiation and cross-shelf patterns of genetic diversity among Great Barrier Reef populations of Symbiodinium. Coral Reefs 28: 215-225.

local : articleId=8011

Genetic differentiation among populations of a broadcast spawning soft coral, Sinularia flexibilis, on the Great Barrier Reef: Bastidas C, Benzie JAH, Uthicke S and Fabricius KE (2001) Genetic differentiation among populations of a broadcast spawning soft coral, Sinularia flexibilis, on the Great Barrier Reef. Marine Biology 138: 517-525.

local : articleId=5816

MTSRF Project 2.5i.3

uri : https://www.rrrc.org.au/mtsrf-project-2-5i-3/

Identifiers
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