Data

Supplementary material for "Arabinogalactan-proteins of Zostera marina L. contain unique glycan structures and provide insight into adaption processes to saline environments"

La Trobe University
Birgit Classen (Aggregated by) KIM JOHNSON (Aggregated by) Lukas Pfeifer (Aggregated by) Thomas Shafee (Aggregated by) Tony Bacic (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26181/5e8c491575d77&rft.title=Supplementary material for Arabinogalactan-proteins of Zostera marina L. contain unique glycan structures and provide insight into adaption processes to saline environments&rft.identifier=10.26181/5e8c491575d77&rft.publisher=La Trobe University&rft.description=A set of supplementary data filesAccompanying publication: Arabinogalactan-proteins of Zostera marina L. contain unique glycan structures and provide insight into adaption processes to saline environments, (MBE 2020 https://doi.org/10.1093/molbev/msaa096)Supplementary Data S1. Classical HRGPs from MAAB (signalP filtered)Unaligned sequences of HRGPs as fasta fileSupplementary Data S2. Chimeras by clan (signalP filtered)Unaligned sequences of chimeric AGPs as fasta files, organised by clan of the globular domainSupplementary Data S3. Enzyme trimmed alignments and treesMultiple sequence alignments of enzymes as fasta files and phylogenetic trees as newick files&rft.creator=Birgit Classen&rft.creator=KIM JOHNSON&rft.creator=Lukas Pfeifer&rft.creator=Thomas Shafee&rft.creator=Tony Bacic&rft.date=2020&rft_rights= https://creativecommons.org/licenses/by/4.0/&rft_rights=© The Authors 2020. This dataset is open access distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0).&rft_subject=Plant cell and molecular biology&rft_subject=Plant physiology&rft_subject=Bioinformatics and computational biology not elsewhere classified&rft_subject=salt adaptation&rft_subject=zostera marina&rft_subject=Arabinogalactan-proteins&rft_subject=Plant Cell and Molecular Biology&rft_subject=Plant Physiology&rft_subject=Bioinformatics&rft.type=dataset&rft.language=English Access the data
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© The Authors 2020. This dataset is open access distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0).

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A set of supplementary data files

Accompanying publication: Arabinogalactan-proteins of Zostera marina L. contain unique glycan structures and provide insight into adaption processes to saline environments, (MBE 2020 https://doi.org/10.1093/molbev/msaa096)


Supplementary Data S1. Classical HRGPs from MAAB (signalP filtered)


Unaligned sequences of HRGPs as fasta file


Supplementary Data S2. Chimeras by clan (signalP filtered)


Unaligned sequences of chimeric AGPs as fasta files, organised by clan of the globular domain


Supplementary Data S3. Enzyme trimmed alignments and trees


Multiple sequence alignments of enzymes as fasta files and phylogenetic trees as newick files

Issued: 07 04 2020

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Subjects
Arabinogalactan-proteins | Bioinformatics | Bioinformatics and computational biology not elsewhere classified | Plant Cell and Molecular Biology | Plant Physiology | Plant cell and molecular biology | Plant physiology | salt adaptation | zostera marina |

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url : https://doi.org/10.1093/molbev/msaa096

Identifiers
ACN 633 798 857