Data

Subcellular Localisation database for Arabidopsis proteins version 5

The University of Western Australia
Hooper, Cornelia ; Millar, Harvey ; Black, Kylie ; Castleden, Ian ; Aryamanesh, Nader ; Grasso, Sally
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26182/8dht-4017&rft.title=Subcellular Localisation database for Arabidopsis proteins version 5&rft.identifier=10.26182/8dht-4017&rft.publisher=The University of Western Australia&rft.description=SUBA (http://suba.live/) is the central resource for Arabidopsis protein subcellular location data. Proteins have specific functions and locations within the plant cell. They generate or are themselves products important for plant growth and response. Protein subcellular location and the proximity relationship of proteins are important clues to function within the metabolic household. Subcellular location can be determined by fluorescent protein tagging or mass spectrometry detection in subcellular purifications and by prediction using protein sequence features. SUBA provides a subcellular data query platform, protein sequence BLAST alignment, a high confidence subcellular locations reference standards and analytic tools.&rft.creator=Hooper, Cornelia &rft.creator=Millar, Harvey &rft.creator=Black, Kylie &rft.creator=Castleden, Ian &rft.creator=Aryamanesh, Nader &rft.creator=Grasso, Sally &rft.date=2022&rft.relation=http://research-repository.uwa.edu.au/en/publications/0ee8f655-d228-4814-9594-06029305a2c5&rft.relation=http://research-repository.uwa.edu.au/en/publications/d92b3be5-689c-406f-97a7-70ea80754a38&rft.relation=http://research-repository.uwa.edu.au/en/publications/0e214b2a-2411-4d3f-872d-24afb553bd55&rft.relation=http://research-repository.uwa.edu.au/en/publications/9dcf25d8-aa99-4e83-ae8e-8af97dd1379e&rft_rights=&rft_subject=Arabidopsis&rft_subject=data analysis centre&rft_subject=compartments&rft_subject=subcellular location,&rft_subject=proteomics&rft_subject=fluorescent proteins&rft_subject=GFP&rft_subject=protein location,&rft_subject=protein-protein interaction&rft_subject=PPI&rft_subject=organelles&rft.type=dataset&rft.language=English Access the data
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SUBA (http://suba.live/) is the central resource for Arabidopsis protein subcellular location data. Proteins have specific functions and locations within the plant cell. They generate or are themselves products important for plant growth and response. Protein subcellular location and the proximity relationship of proteins are important clues to function within the metabolic household. Subcellular location can be determined by fluorescent protein tagging or mass spectrometry detection in subcellular purifications and by prediction using protein sequence features. SUBA provides a subcellular data query platform, protein sequence BLAST alignment, a high confidence subcellular locations reference standards and analytic tools.

Notes

Associated Persons
Ian Castleden (Creator); Nader Aryamanesh (Contributor); Sally Grasso (Contributor)

Created: 2022-08-19 to 2022-08-19

Issued: 2022-08-31

Data time period: 1999-01-01 to 2020-06-30

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  • Associated with SUBA5 provides a central resource for exploring Arabidopsis protein subcellular location data. Proteins have specific functions and locations within the plant cell. They generate or are themselves products important for plant growth and response. Protein subcellular location and the proximity relationship of proteins are important clues to function within the metabolic household. Subcellular location can be determined by fluorescent protein tagging or mass spectrometry detection in subcellular purifications and by prediction using protein sequence features. SUBA5 contains a subcellular data query platform, protein sequence BLAST alignment, a high confidence subcellular locations reference standards and analytic tools.
    suba.live/
Subjects
Arabidopsis | GFP | PPI | compartments | data analysis centre | fluorescent proteins | organelles | protein location, | protein-protein interaction | proteomics | subcellular location, |

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