Data

Subcellular Localisation database for Arabidopsis proteins version 3

The University of Western Australia
Tanz, Sandra ; Hooper, Cornelia
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/23/59151525d122a&rft.title=Subcellular Localisation database for Arabidopsis proteins version 3&rft.identifier=10.4225/23/59151525d122a&rft.publisher=The University of Western Australia&rft.description=The subcellular location database for Arabidopsis proteins SUBA3, http://suba.plantenergy.uwa.edu.au) combines manual literature curation of largescale subcellular proteomics, fluorescent protein visualization and protein–protein interaction (PPI) datasets with subcellular targeting calls from 22 prediction programs. Overall, nearly 650 000 new calls of subcellular location for Arabidopsis proteins (TAIR10) are included. To determine as objectively as possible where a particular protein is located, we have developed SUBAcon, a Bayesian approach that incorporates experimental localization and targeting prediction data to best estimate a protein’s location in the cell.&rft.creator=Tanz, Sandra &rft.creator=Hooper, Cornelia &rft.date=2016&rft.relation=http://research-repository.uwa.edu.au/en/publications/3fe07b58-c7d9-4b7e-9854-9109c125bbb7&rft.relation=http://research-repository.uwa.edu.au/en/publications/9dcf25d8-aa99-4e83-ae8e-8af97dd1379e&rft.relation=http://research-repository.uwa.edu.au/en/publications/0e214b2a-2411-4d3f-872d-24afb553bd55&rft.relation=http://research-repository.uwa.edu.au/en/publications/0d1236af-bfda-4a28-85d2-fa68f34bb69e&rft.coverage=115.81880986690521,-31.982462166545037&rft.coverage=115.81880986690521,-31.982462166545037&rft_rights=&rft_rights=The University of Western Australia claims copyright ownership of all information stored on its websites, unless expressedly stated otherwise. Moral rights reside with the authors, unless expressedly states otherwise. Please contact the authors in the first instance if you wish to copy, use or link to a particular page or article.&rft_subject=subcellular localisation&rft_subject=proteomics&rft_subject=GFP&rft_subject=fusion protein&rft_subject=protein-protein interaction&rft_subject=fluorescent protein&rft_subject=PPI&rft_subject=Arabidopsis&rft_subject=organelles&rft_subject=cellular compartments&rft_subject=model plant&rft_subject=protein location&rft.type=dataset&rft.language=English Access the data
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The University of Western Australia claims copyright ownership of all information stored on its websites, unless expressedly stated otherwise. Moral rights reside with the authors, unless expressedly states otherwise. Please contact the authors in the first instance if you wish to copy, use or link to a particular page or article.

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The subcellular location database for Arabidopsis proteins SUBA3, http://suba.plantenergy.uwa.edu.au) combines manual literature curation of largescale subcellular proteomics, fluorescent protein visualization and protein–protein interaction (PPI) datasets with subcellular targeting calls from 22 prediction programs. Overall, nearly 650 000 new calls of subcellular location for Arabidopsis proteins (TAIR10) are included. To determine as objectively as possible where a particular protein is located, we have developed SUBAcon, a Bayesian approach that incorporates experimental localization and targeting prediction data to best estimate a protein’s location in the cell.

Created: 2012-06-01 to 2016-07-31

Issued: 2016-12-13

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115.81881,-31.98246

115.81880986691,-31.982462166545

text: 115.81880986690521,-31.982462166545037

Subjects
Arabidopsis | GFP | PPI | cellular compartments | fluorescent protein | fusion protein | model plant | organelles | protein location | protein-protein interaction | proteomics | subcellular localisation |

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