Data

SMACs

The University of Queensland
Dr Quan Nguyen (Aggregated by) Dr Quan Nguyen (Aggregated by) Mr Onkar Mulay (Aggregated by) Mr Onkar Mulay (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/2f40a80&rft.title=SMACs&rft.identifier=RDM ID: ab098fc0-5000-4509-bfd9-a89a589f2752&rft.publisher=The University of Queensland&rft.description=The dataset contains processed data, which includes two .rds files. The first .rds file is an integrated Seurat object which contains raw, processed and integrated assays/gene expression data for all five aorgans and both technologies. The other .rds file includes cell-type proportions from RCTD for each barcode/spot. Additionally, we also provide partial outputs from the SAW pipeline to run the cell segmentation method to obtain spatial single-cell data. This includes aligned BAM files, mask files, and image data.&rft.creator=Dr Quan Nguyen&rft.creator=Dr Quan Nguyen&rft.creator=Mr Onkar Mulay&rft.creator=Mr Onkar Mulay&rft.date=2026&rft_rights= https://guides.library.uq.edu.au/deposit-your-data/license-reuse-data-agreement&rft_subject=eng&rft_subject=Bioinformatic methods development&rft_subject=Bioinformatics and computational biology&rft_subject=BIOLOGICAL SCIENCES&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Contact Information

[email protected]
Faculty of Engineering, Architecture and Information Technology

Full description

The dataset contains processed data, which includes two .rds files. The first .rds file is an integrated Seurat object which contains raw, processed and integrated assays/gene expression data for all five aorgans and both technologies. The other .rds file includes cell-type proportions from RCTD for each barcode/spot. Additionally, we also provide partial outputs from the SAW pipeline to run the cell segmentation method to obtain spatial single-cell data. This includes aligned BAM files, mask files, and image data.

Issued: 2026

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Related Websites

Subjects
Biological Sciences | Bioinformatic Methods Development | Bioinformatics and Computational Biology | eng |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
Research Data Collections

local : UQ:289097

Identifiers