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Scripts and data from: High germline mutation rates, but not extreme population outbreaks, influence genetic diversity in a keystone coral predator

The University of Queensland
Dr Iva Popovic (Aggregated by) Dr Iva Popovic (Aggregated by) Professor Cynthia Riginos (Aggregated by) Professor Cynthia Riginos (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/ad122d0&rft.title=Scripts and data from: High germline mutation rates, but not extreme population outbreaks, influence genetic diversity in a keystone coral predator&rft.identifier=RDM ID: 86d79237-ea9e-4ef2-842e-058714d26311&rft.publisher=The University of Queensland&rft.description=This Dataset contains all supporting scripts and associated data files for genomic sequence processing, variant calling, mutation rate estimation and analysis, and effective population size estimation in Acanthaster cf. solaris. Code and data relating to census population size analyses are available on Github: https://github.com/ymbozec/acanthaster_GBR_abundance. Raw whole genome sequence data from parent-offspring trios are available on the NCBI Short Read Archive (BioProject ID PRJNA1064695). A version of this manuscript is available on the bioRxiv repository at doi: https://doi.org/10.1101/2023.06.28.546961.&rft.creator=Dr Iva Popovic&rft.creator=Dr Iva Popovic&rft.creator=Professor Cynthia Riginos&rft.creator=Professor Cynthia Riginos&rft.date=2024&rft_rights= https://guides.library.uq.edu.au/deposit-your-data/license-reuse-data-agreement&rft_subject=eng&rft_subject=Evolutionary ecology&rft_subject=Evolutionary biology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Genomics&rft_subject=Genetics&rft.type=dataset&rft.language=English Access the data
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[email protected]
School of the Environment

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This Dataset contains all supporting scripts and associated data files for genomic sequence processing, variant calling, mutation rate estimation and analysis, and effective population size estimation in Acanthaster cf. solaris. Code and data relating to census population size analyses are available on Github: https://github.com/ymbozec/acanthaster_GBR_abundance. Raw whole genome sequence data from parent-offspring trios are available on the NCBI Short Read Archive (BioProject ID PRJNA1064695). A version of this manuscript is available on the bioRxiv repository at doi: https://doi.org/10.1101/2023.06.28.546961.

Issued: 2024

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Subjects
Biological Sciences | Evolutionary Biology | Evolutionary Ecology | Genetics | Genomics | eng |

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