Data

Rice Aroma - 33, 275 SNP Matrix

The University of Queensland
Dr Dara Daygon (Aggregated by) Dr Dara Daygon (Aggregated by) Honorary Professor Melissa Fitzgerald (Aggregated by) Professor Melissa Fitzgerald (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.14264/uql.2017.174&rft.title=Rice Aroma - 33, 275 SNP Matrix&rft.identifier=10.14264/uql.2017.174&rft.publisher=The University of Queensland&rft.description=DNA from 380 rice samples were extracted and submitted to the BioResource Center at Cornell University (Ithaca, NY) for genotyping-by-sequencing. Tags were aligned to the Nipponbarre reference genome (MSU version 7.0) using the Burrows-Wheeler Aligner version 0.7.8-r455 (BWA). SNPs missing in more than 25% of the data set were filtered along with SNPs with minor allele frequency (MAF) of 5%.&rft.creator=Dr Dara Daygon&rft.creator=Dr Dara Daygon&rft.creator=Honorary Professor Melissa Fitzgerald&rft.creator=Professor Melissa Fitzgerald&rft.date=2017&rft_rights=2017, The University of Queensland&rft_rights= http://guides.library.uq.edu.au/deposit_your_data/terms_and_conditions&rft_subject=eng&rft_subject=Genotyping by sequencing (GbS)&rft_subject=Single nucleotide polymorphisms (SNPs)&rft_subject=GENETICS&rft_subject=BIOLOGICAL SCIENCES&rft_subject=AGRICULTURAL BIOTECHNOLOGY&rft_subject=TECHNOLOGY&rft.type=dataset&rft.language=English Access the data
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DNA from 380 rice samples were extracted and submitted to the BioResource Center at Cornell University (Ithaca, NY) for genotyping-by-sequencing. Tags were aligned to the Nipponbarre reference genome (MSU version 7.0) using the Burrows-Wheeler Aligner version 0.7.8-r455 (BWA). SNPs missing in more than 25% of the data set were filtered along with SNPs with minor allele frequency (MAF) of 5%.

Issued: 2017

Data time period: 27 01 2014 to 27 08 2014

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Subjects
Agricultural Biotechnology | Biological Sciences | Genetics | Genotyping by sequencing (GbS) | Single nucleotide polymorphisms (SNPs) | Technology | eng |

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