Data

Plant Genomics Sequence Data

The University of Queensland
Professor Robert Henry (Aggregated by) Professor Robert Henry (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.14264/uql.2017.84&rft.title=Plant Genomics Sequence Data&rft.identifier=10.14264/uql.2017.84&rft.publisher=The University of Queensland&rft.description=The collection comprises transcriptome, amplicon and genomics data generated for various plant species using next generation sequencing tools. The data in this collection is an outcome from various current and past research projects, and is an important collection of genetic data for various plant species. The data provides an important insight into the genes and various snapshots of how genes behave. This data could be used for research on conservation, phylogeny, and identification of crucial genes for use in plant breeding. The data was generated from plant species important to Australia for food and fuel use, for use in conservation, and in increasing productivity via breeding. Species included are rice, macadamia, wheat, eucalypt, and sugarcane.&rft.creator=Professor Robert Henry&rft.creator=Professor Robert Henry&rft.date=2014&rft_rights=2014, The University of Queensland.&rft_rights=&rft_subject=eng&rft_subject=Plant genomics&rft_subject=Next generation sequencing&rft_subject=Plant species&rft_subject=Wheat&rft_subject=Rice&rft_subject=Macadamia&rft_subject=Sugarcane&rft_subject=Eucalypts&rft_subject=Plant breeding&rft_subject=Cereal crops&rft_subject=Hybrid cereals&rft_subject=Molecular Evolution&rft_subject=BIOLOGICAL SCIENCES&rft_subject=GENETICS&rft_subject=Gene Expression (incl. Microarray and other genome-wide approaches)&rft_subject=Genomics&rft_subject=Crop and Pasture Improvement (Selection and Breeding)&rft_subject=AGRICULTURAL AND VETERINARY SCIENCES&rft_subject=CROP AND PASTURE PRODUCTION&rft.type=dataset&rft.language=English Access the data
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2014, The University of Queensland.

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robert.henry@uq.edu.au

Full description

The collection comprises transcriptome, amplicon and genomics data generated for various plant species using next generation sequencing tools. The data in this collection is an outcome from various current and past research projects, and is an important collection of genetic data for various plant species. The data provides an important insight into the genes and various snapshots of how genes behave. This data could be used for research on conservation, phylogeny, and identification of crucial genes for use in plant breeding. The data was generated from plant species important to Australia for food and fuel use, for use in conservation, and in increasing productivity via breeding. Species included are rice, macadamia, wheat, eucalypt, and sugarcane.

Issued: 2014

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Subjects
Agricultural and Veterinary Sciences | Biological Sciences | Crop and Pasture Production | Cereal crops | Crop and Pasture Improvement (Selection and Breeding) | Eucalypts | Genetics | Gene Expression (Incl. Microarray and Other Genome-Wide Approaches) | Genomics | Hybrid cereals | Macadamia | Molecular Evolution | Next generation sequencing | Plant breeding | Plant genomics | Plant species | Rice | Sugarcane | Wheat | eng |

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Other Information
Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant

local : UQ:279555

Bundock, Peter C., Casu, Rosanne E. and Henry, Robert J. (2012). Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant. Plant Biotechnology Journal, 10 (6), 657-667. doi: 10.1111/j.1467-7652.2012.00707.x

Gene expression in the developing aleurone and starchy endosperm of wheat

local : UQ:278625

Gillies, Susan A., Futardo, Agnelo and Henry, Robert J. (2012). Gene expression in the developing aleurone and starchy endosperm of wheat. Plant Biotechnology Journal, 10 (6), 668-679. doi: 10.1111/j.1467-7652.2012.00705.x

Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing

local : UQ:266882

Kharabian-Masouleh, Ardashir, Waters, Daniel L. E., Reinke, Russell F. and Henry, Robert J. (2011). Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing. Plant Biotechnology Journal, 9 (9), 1074-1085. doi: 10.1111/j.1467-7652.2011.00629.x

Characterizing homologues of crop domestication genes in poorly described wild relatives by high-throughput sequencing of whole genomes

local : UQ:266883

Malory, Sylvia, Shapter, Frances M., Elphinstone, Martin S., Chivers, Ian H. and Henry, Robert J. (2011). Characterizing homologues of crop domestication genes in poorly described wild relatives by high-throughput sequencing of whole genomes. Plant Biotechnology Journal, 9 (9), 1131-1140. doi: 10.1111/j.1467-7652.2011.00640.x

A high-throughput assay for rapid and simultaneous analysis of perfect markers for important quality and agronomic traits in rice using multiplexed MALDI-TOF mass spectrometry

local : UQ:232864

Masouleh, Ardashir K., Waters, Daniel L. E., Reinke, Russel F. and Henry, Robert J. (2009). A high-throughput assay for rapid and simultaneous analysis of perfect markers for important quality and agronomic traits in rice using multiplexed MALDI-TOF mass spectrometry. Plant Biotechnology Journal, 7 (4), 355-363. doi: 10.1111/j.1467-7652.2009.00411.x

Chloroplast genome sequences from total DNA for plant identification

local : UQ:245640

Nock, Catherine J., Waters, Daniel L. E., Edwards, Mark A., Bowen, Stirling G., Rice, Nicole, Cordeiro, Giovanni M. and Henry, Robert J. (2011). Chloroplast genome sequences from total DNA for plant identification. Plant Biotechnology Journal, 9 (3), 328-333. doi: 10.1111/j.1467-7652.2010.00558.x

Research Data Collections

local : UQ:289097

Queensland Alliance for Agriculture and Food Innovation

local : UQ:246627

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