Data

Placental Imprinting Pilot

The University of Queensland
Associate Professor Adam Ewing (Aggregated by) Dr Adam Ewing (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/ce7d435&rft.title=Placental Imprinting Pilot&rft.identifier=RDM ID: 150b7725-41cc-4ae3-8983-1919abd794aa&rft.publisher=The University of Queensland&rft.description=Pilot study published in Kindlova et al, preprint available with detailed data description at https://www.biorxiv.org/content/10.1101/2023.02.13.528289v1. Data consist of Nanopore sequence data on 8 placentas, Illumina WGS on 8 placentas and parents (total 24 samples), and RNA-seq data from 8 placentas, EM-seq data from two placentas, and methylartist database files for all placenta samples. All data apart from the .db files are provided as .bam files. Methylartist .db files can be used along with the corresponding .bam file via methylartist (https://doi.org/10.1093/bioinformatics/btac292) available at https://github.com/adamewing/methylartist.&rft.creator=Associate Professor Adam Ewing&rft.creator=Dr Adam Ewing&rft.date=2024&rft_rights= http://guides.library.uq.edu.au/deposit_your_data/terms_and_conditions&rft_subject=eng&rft_subject=Genomics and transcriptomics&rft_subject=Bioinformatics and computational biology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Epigenetics (incl. genome methylation and epigenomics)&rft_subject=Genetics&rft.type=dataset&rft.language=English Access the data
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[email protected]
Mater Research Institute-UQ

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Pilot study published in Kindlova et al, preprint available with detailed data description at https://www.biorxiv.org/content/10.1101/2023.02.13.528289v1. Data consist of Nanopore sequence data on 8 placentas, Illumina WGS on 8 placentas and parents (total 24 samples), and RNA-seq data from 8 placentas, EM-seq data from two placentas, and methylartist database files for all placenta samples. All data apart from the .db files are provided as .bam files. Methylartist .db files can be used along with the corresponding .bam file via methylartist (https://doi.org/10.1093/bioinformatics/btac292) available at https://github.com/adamewing/methylartist.

Issued: 20 12 2024

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Subjects
Biological Sciences | Bioinformatics and Computational Biology | Epigenetics (Incl. Genome Methylation and Epigenomics) | Genetics | Genomics and Transcriptomics | eng |

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