Data

Next-Generation Sequencing of COLO-829 Tumour/Normal Melanoma Cell Line Pair

The University of Queensland
Dr John Pearson (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://espace.library.uq.edu.au/view/UQ:326016&rft.title=Next-Generation Sequencing of COLO-829 Tumour/Normal Melanoma Cell Line Pair&rft.publisher=The University of Queensland&rft.description=This collection contains next-generation sequencing BAM files from the COLO-829 tumour/normal melanoma cell line pair sequenced using 3 platforms – (1) Illumina HiSeq whole genome; (2) Life Technologies SOLiD whole genome; (3) Life Technologies SOLiD exome sequencing using the Agilent SureSelect 50 Mbase enrichment kit. This dataset provides a high coverage reference set of sequences that can be used to examine the performance of somatic variant calling algorithms in cancer. The dataset allows comparison of two different sequencing platforms (SOLiD and HiSeq) as well as an examination of the sensitivity and specificity effects of sequencing exomes as compared with genomes.&rft.creator=Dr John Pearson&rft.date=2014&rft_rights=2014, The University of Queensland.&rft_rights= https://guides.library.uq.edu.au/deposit-your-data/license-reuse-data-agreement&rft_subject=eng&rft_subject=COLO-829 tumour&rft_subject=Melanoma&rft_subject=Cell line pair&rft_subject=Sequencing&rft_subject=Cancer&rft_subject=Next generation sequencing&rft_subject=Genomics&rft_subject=BIOLOGICAL SCIENCES&rft_subject=GENETICS&rft_subject=Cancer Genetics&rft_subject=MEDICAL AND HEALTH SCIENCES&rft_subject=ONCOLOGY AND CARCINOGENESIS&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Licence & Rights:

Other view details

Access:

Restrictions apply

Contact Information

[email protected]

Full description

This collection contains next-generation sequencing BAM files from the COLO-829 tumour/normal melanoma cell line pair sequenced using 3 platforms – (1) Illumina HiSeq whole genome; (2) Life Technologies SOLiD whole genome; (3) Life Technologies SOLiD exome sequencing using the Agilent SureSelect 50 Mbase enrichment kit. This dataset provides a high coverage reference set of sequences that can be used to examine the performance of somatic variant calling algorithms in cancer. The dataset allows comparison of two different sequencing platforms (SOLiD and HiSeq) as well as an examination of the sensitivity and specificity effects of sequencing exomes as compared with genomes.

Issued: 2014

Data time period: 2009 to 2014

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related Data

Related People

Related Grants and Projects

Subjects
Biological Sciences | COLO-829 tumour | Cancer | Cancer Genetics | Cell line pair | Genetics | Genomics | Medical and Health Sciences | Melanoma | Next generation sequencing | Oncology and Carcinogenesis | Sequencing | eng |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
ACN 633 798 857