Data

Microbiome dynamics across life stages, generations and climate treatments in a tropical sea urchin

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://geo.aims.gov.au/geonetwork/geonetwork/srv/eng/search?uuid=b5cbcbcd-0b19-4344-9aa8-7bbdd9201eb7&rft.title=Microbiome dynamics across life stages, generations and climate treatments in a tropical sea urchin&rft.identifier=http://geo.aims.gov.au/geonetwork/geonetwork/srv/eng/search?uuid=b5cbcbcd-0b19-4344-9aa8-7bbdd9201eb7&rft.publisher=Australian Institute of Marine Science (AIMS)&rft.description=Given the critical role of microbes in host health, understanding microbial contribution to transgenerational plasticity is essential for generating realistic predictions of coral reef responses to future climate. Through a 4-year multigenerational experiment, the microbial dynamics in the tropical sea urchin Echinometra sp. A were explored under temperature and pCO2 levels predicted for years 2050 and 2100 (RCP 8.5). Publication of this study: Marangon, E., Uthicke, S., Patel, F., Marzinelli, E. M., Bourne, D. G., Webster, N. S., & Laffy, P. W. (2023). Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 00, 1–16. https://doi.org/10.1111/mec.17124 Realted papers from the same experimental study (urchin physiological and behavioural performances): Uthicke, S., Patel, F., Karelitz, S., Luter, H., Webster, N., & Lamare, M. (2020). Key biological responses over two generations of the sea urchin Echinometra sp. A under future ocean conditions. Marine Ecology Progress Series, 637, 87–101. https://doi.org/10.3354/meps13236 Karelitz, S., Lamare, M., Patel, F., Gemmell, N., & Uthicke, S. (2020). Parental acclimation to future ocean conditions increases development rates but decreases survival in sea urchin larvae. Marine Biology, 167(1), 2. https://doi.org/10.1007/s00227-019-3610-5 Uthicke, S., Patel, F., Petrik, C., Watson, S., Karelitz, S. E., & Lamare, M. D. (2021). Cross-generational response of a tropical sea urchin to global change and a selection event in a 43-month mesocosm study. Glob Change Biol, 27: 3448-3462. https://doi.org/10.1111/gcb.15657Maintenance and Update Frequency: notPlanned&rft.creator=Australian Institute of Marine Science (AIMS) &rft.date=2024&rft.coverage=westlimit=146.80755615234378; southlimit=-18.361857147725765; eastlimit=146.80755615234378; northlimit=-18.361857147725765&rft.coverage=westlimit=146.80755615234378; southlimit=-18.361857147725765; eastlimit=146.80755615234378; northlimit=-18.361857147725765&rft_rights=All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=The data was collected under contract between AIMS and another party(s). Specific agreements for access and use of the data shall be negotiated separately. Contact the AIMS Data Centre (adc@aims.gov.au) for further information&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data
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All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

The data was collected under contract between AIMS and another party(s). Specific agreements for access and use of the data shall be negotiated separately. Contact the AIMS Data Centre (adc@aims.gov.au) for further information

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Contact Information

reception@aims.gov.au
adc@aims.gov.au

Brief description

Given the critical role of microbes in host health, understanding microbial contribution to transgenerational plasticity is essential for generating realistic predictions of coral reef responses to future climate. Through a 4-year multigenerational experiment, the microbial dynamics in the tropical sea urchin Echinometra sp. A were explored under temperature and pCO2 levels predicted for years 2050 and 2100 (RCP 8.5).


Publication of this study:


Marangon, E., Uthicke, S., Patel, F., Marzinelli, E. M., Bourne, D. G., Webster, N. S., & Laffy, P. W. (2023). Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 00, 1–16. https://doi.org/10.1111/mec.17124


Realted papers from the same experimental study (urchin physiological and behavioural performances):


Uthicke, S., Patel, F., Karelitz, S., Luter, H., Webster, N., & Lamare, M. (2020). Key biological responses over two generations of the sea urchin Echinometra sp. A under future ocean conditions. Marine Ecology Progress Series, 637, 87–101. https://doi.org/10.3354/meps13236


Karelitz, S., Lamare, M., Patel, F., Gemmell, N., & Uthicke, S. (2020). Parental acclimation to future ocean conditions increases development rates but decreases survival in sea urchin larvae. Marine Biology, 167(1), 2. https://doi.org/10.1007/s00227-019-3610-5


Uthicke, S., Patel, F., Petrik, C., Watson, S., Karelitz, S. E., & Lamare, M. D. (2021). Cross-generational response of a tropical sea urchin to global change and a selection event in a 43-month mesocosm study. Glob Change Biol, 27: 3448-3462. https://doi.org/10.1111/gcb.15657

Lineage

Maintenance and Update Frequency: notPlanned

Notes

Credit
Laffy, PW. AIMS
Credit
Webster, NS. AIMS, University of Queensland and Australian Antarctic Division
Credit
Marzinelli, EM. The University of Sydney and Singapore Centre for Environmental Life Sciences Engineering
Credit
Patel, F. AIMS
Credit
Marangon, E. James Cook University (JCU), Australian Institute of Marine Science (AIMS) and AIMS@JCU
Credit
Bourne, DG. AIMS
Credit
Uthicke, S. AIMS

Modified: 13 03 2024

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146.80756,-18.36186

146.80755615234,-18.361857147726

text: westlimit=146.80755615234378; southlimit=-18.361857147725765; eastlimit=146.80755615234378; northlimit=-18.361857147725765

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Other Information
Marangon, E., Uthicke, S., Patel, F., Marzinelli, E. M., Bourne, D. G., Webster, N. S., & Laffy, P. W. (2023). Life-stage specificity and cross-generational climate effects on the microbiome of a tropical sea urchin (Echinodermata: Echinoidea). Molecular Ecology, 00, 1–16. https://doi.org/10.1111/mec.17124

doi : https://doi.org/10.1111/mec.17124

Raw 16S rRNA gene sequencing data Bioproject PRJNA1013433

uri : https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1013433

R scripts for data analysis

uri : https://github.com/emarangon/Cross-generational-climate-effects-on-the-urchin-microbiome

Identifiers
  • global : b5cbcbcd-0b19-4344-9aa8-7bbdd9201eb7
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