Data

Lentil ILL6002 x Indianhead RIL population genotype data

Curtin University
Lars Kamphuis (Principal investigator) Bernadette Henares (Aggregated by) Bethany Clark (Aggregated by) Christina Grime (Aggregated by) Em Thackwray (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25917/hh5h-jg96&rft.title=Lentil ILL6002 x Indianhead RIL population genotype data&rft.identifier=https://doi.org/10.25917/hh5h-jg96&rft.publisher=Curtin University&rft.description=Data description: This dataset includes genotype data generated using the Agriculture Victoria multispecies pulse 30K single-nucleotide polymorphism (SNP) chip, containing 10,528 lentil-specific SNPs (Sudheesh et al., 2023). In addition to the 186 RIL individuals, material from both parents was included in duplicate as both a reference, and an internal control. The genotype file is an excel spreadsheet containing the names of the RILs/parental genotypes in column A, followed by the multispecies pulse 30K SNP marker names and genotype data with the alleles called as SS for the Ascochyta blight susceptible parent ILL6002 and RR for the Ascochyta blight resistant parent Indianhead. Full details on how the genotype calls were made are described in Thackwray et al 2025 (https://doi.org/10.1002/tpg2.70097). Number of files/types: 1 csv file Special software required to open files: Microsoft Excel or Notepad++ Geographic information (if relevant): Australia Keywords: Lens culinaris, legume, lentil, genotype data, genetic map, pulse SNP chip&rft.creator=Lars Kamphuis&rft.date=2026&rft_rights=&rft_subject=Crop and pasture improvement (incl. selection and breeding)&rft_subject=Crop and pasture production&rft_subject=AGRICULTURAL, VETERINARY AND FOOD SCIENCES&rft_subject=Crop and pasture protection (incl. pests, diseases and weeds)&rft_subject=Plant pathology&rft_subject=Plant biology&rft_subject=BIOLOGICAL SCIENCES&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Licence & Rights:

Open Licence view details
CC-BY

Access:

Open

Full description

Data description: This dataset includes genotype data generated using the Agriculture Victoria multispecies pulse 30K single-nucleotide polymorphism (SNP) chip, containing 10,528 lentil-specific SNPs (Sudheesh et al., 2023). In addition to the 186 RIL individuals, material from both parents was included in duplicate as both a reference, and an internal control. The genotype file is an excel spreadsheet containing the names of the RILs/parental genotypes in column A, followed by the multispecies pulse 30K SNP marker names and genotype data with the alleles called as "SS" for the Ascochyta blight susceptible parent ILL6002 and "RR" for the Ascochyta blight resistant parent Indianhead. Full details on how the genotype calls were made are described in Thackwray et al 2025 (https://doi.org/10.1002/tpg2.70097).

Number of files/types: 1 csv file
Special software required to open files: Microsoft Excel or Notepad++

Geographic information (if relevant): Australia

Keywords: Lens culinaris, legume, lentil, genotype data, genetic map, pulse SNP chip

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Subjects
Agricultural, Veterinary and Food Sciences | Biological Sciences | Crop and Pasture Improvement (Incl. Selection and Breeding) | Crop and Pasture Production | Crop and Pasture Protection (Incl. Pests, Diseases and Weeds) | Plant Biology | Plant Pathology |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
Genetic mapping of Ascochyta blight resistance in an ILL6002 × Indianhead lentil mapping population

doi : https://doi.org/10.1002/tpg2.70097

Identifiers