Data

Identifying ecological change and its causes: a case study on coral reefs

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://apps.aims.gov.au/metadata/view/1f06bbe8-2031-4250-b9ce-85c6c9044b1d&rft.title=Identifying ecological change and its causes: a case study on coral reefs&rft.identifier=https://apps.aims.gov.au/metadata/view/1f06bbe8-2031-4250-b9ce-85c6c9044b1d&rft.publisher=Australian Institute of Marine Science (AIMS)&rft.description=The study is based on water quality analyses, and ecological surveys of benthic cover, biodiversity, and octocoral community structure. Three groups of ecological attributes were used to discriminate between potential causes of chage: benthos cover, octocoral richness, and community structure.Field research was carried out in two regions within the Great Barrier Reef (GBR) with differing water quality gradients: one that receives river flood plumes from agricultural areas and one exposed to runoff from catchments with little or no agriculture.One-off surveys characterised 54 reef sites across the whole continental shelf, and targeted research on 13 inshore reefs between 2000 and 2002. An additional 40 mid- and outer-shelf reef sites were visited within the two regions for cross-shelf one-off surveys of benthic cover and octocoral communities. Surveys were conducted on two sites per reef (windward and leeward sides) at five depth zones per site (0–18 m); each survey at each depth zone covered ;500 m2 of reef area. Survey data were collected on percentage cover of the main benthos groups (hard coral, octocoral, macro algae, turf algae, coralline algae, sand and rubble) and taxonomic inventories and abundance estimates (rating 0–5) of all genera of octocorals.Ecological attributes with contrasting responses to bleaching, crown-of-thorns seastar predation, runoff, and cyclones were chosen for the study. The chosen attributes were:1) Benthic cover of hard corals, octocorals, and macroalgae. These are the main groups of organisms usually measured in the assessment of coral reefs, and were expected to respond to changing environmental conditions and disturbances in contrasting ways.2) Taxonomic richness of zooxanthellate and azooxanthellate octocorals (Anthozoa, Octocorallia; commonly termed ‘‘soft corals’’ and ‘‘sea fans’’). This group contains genera with and without symbiotic algae (called zooxanthellae) in their tissue, the former group depending on water clarity and light for photosynthetic nutrition, whereas the latter group is independent of water clarity (Fabricius and De’ath 2001). Octocorals were chosen as indicators for ecological attributes because of their abundance, and because they respond more specifically to water quality than hard corals; azooxanthellate octocorals (which constitute about half of the genera) do not suffer from coral bleaching, while zooxanthellate octocorals respond strongly to turbidity, probably because of low photosynthetic efficiency (Fabricius and Klumpp 1995). Octocorals are also rarely eaten by crown-of-thorns seastar (De’ath and Moran 1998).3) Community structure of octocorals on both the inshore target reefs and along the cross-shelf chlorophyll gradient. This measure was chosen because communities are known to respond more strongly to environmental conditions than abundances of the main groups (K. E. Fabricius, unpublished data).The surveys showed increasing macroalgal cover and decreasing octocoral biodiversity along the gradients within each of the regions, and low hard coral and octocoral cover in the region exposed to terrestrial runoff.Maintenance and Update Frequency: notPlannedStatement: One-off rapid ecological assessment surveys (Fabricius and De’ath 2001, Fabricius and Alderslade 2001)&rft.creator=Australian Institute of Marine Science (AIMS) &rft.date=2025&rft.coverage=westlimit=145.22552490234378; southlimit=-18.161510984517324; eastlimit=146.77185058593753; northlimit=-15.080079689764347&rft.coverage=westlimit=145.22552490234378; southlimit=-18.161510984517324; eastlimit=146.77185058593753; northlimit=-15.080079689764347&rft.coverage=westlimit=143.42651367187503; southlimit=-14.50914435335839; eastlimit=144.45922851562503; northlimit=-13.443052132777558&rft.coverage=westlimit=143.42651367187503; southlimit=-14.50914435335839; eastlimit=144.45922851562503; northlimit=-13.443052132777558&rft_rights=All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=The data was collected under contract between AIMS and another party(s). Specific agreements for access and use of the data shall be negotiated separately. Contact the AIMS Data Centre ([email protected]) for further information&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data

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All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

The data was collected under contract between AIMS and another party(s). Specific agreements for access and use of the data shall be negotiated separately. Contact the AIMS Data Centre ([email protected]) for further information

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Full description

The study is based on water quality analyses, and ecological surveys of benthic cover, biodiversity, and octocoral community structure. Three groups of ecological attributes were used to discriminate between potential causes of chage: benthos cover, octocoral richness, and community structure.


Field research was carried out in two regions within the Great Barrier Reef (GBR) with differing water quality gradients: one that receives river flood plumes from agricultural areas and one exposed to runoff from catchments with little or no agriculture.


One-off surveys characterised 54 reef sites across the whole continental shelf, and targeted research on 13 inshore reefs between 2000 and 2002. An additional 40 mid- and outer-shelf reef sites were visited within the two regions for cross-shelf one-off surveys of benthic cover and octocoral communities. Surveys were conducted on two sites per reef (windward and leeward sides) at five depth zones per site (0–18 m); each survey at each depth zone covered ;500 m2 of reef area. Survey data were collected on percentage cover of the main benthos groups (hard coral, octocoral, macro algae, turf algae, coralline algae, sand and rubble) and taxonomic inventories and abundance estimates (rating 0–5) of all genera of octocorals.


Ecological attributes with contrasting responses to bleaching, crown-of-thorns seastar predation, runoff, and cyclones were chosen for the study. The chosen attributes were:


1) Benthic cover of hard corals, octocorals, and macroalgae. These are the main groups of organisms usually measured in the assessment of coral reefs, and were expected to respond to changing environmental conditions and disturbances in contrasting ways.


2) Taxonomic richness of zooxanthellate and azooxanthellate octocorals (Anthozoa, Octocorallia; commonly termed ‘‘soft corals’’ and ‘‘sea fans’’). This group contains genera with and without symbiotic algae (called zooxanthellae) in their tissue, the former group depending on water clarity and light for photosynthetic nutrition, whereas the latter group is independent of water clarity (Fabricius and De’ath 2001). Octocorals were chosen as indicators for ecological attributes because of their abundance, and because they respond more specifically to water quality than hard corals; azooxanthellate octocorals (which constitute about half of the genera) do not suffer from coral bleaching, while zooxanthellate octocorals respond strongly to turbidity, probably because of low photosynthetic efficiency (Fabricius and Klumpp 1995). Octocorals are also rarely eaten by crown-of-thorns seastar (De’ath and Moran 1998).


3) Community structure of octocorals on both the inshore target reefs and along the cross-shelf chlorophyll gradient. This measure was chosen because communities are known to respond more strongly to environmental conditions than abundances of the main groups (K. E. Fabricius, unpublished data).


The surveys showed increasing macroalgal cover and decreasing octocoral biodiversity along the gradients within each of the regions, and low hard coral and octocoral cover in the region exposed to terrestrial runoff.

Lineage

Maintenance and Update Frequency: notPlanned
Statement: One-off rapid ecological assessment surveys (Fabricius and De’ath 2001, Fabricius and Alderslade 2001)

Notes

Credit
Fabricius, K. Australian Institute of Marine Science (AIMS)
Credit
De'Ath, G. (AIMS)

Modified: 08 2025

This dataset is part of a larger collection

Click to explore relationships graph

146.77185,-15.08008 146.77185,-18.16151 145.22552,-18.16151 145.22552,-15.08008 146.77185,-15.08008

145.99868774414,-16.62079533714

144.45923,-13.44305 144.45923,-14.50914 143.42651,-14.50914 143.42651,-13.44305 144.45923,-13.44305

143.94287109376,-13.976098243068

text: westlimit=145.22552490234378; southlimit=-18.161510984517324; eastlimit=146.77185058593753; northlimit=-15.080079689764347

text: westlimit=143.42651367187503; southlimit=-14.50914435335839; eastlimit=144.45922851562503; northlimit=-13.443052132777558

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Other Information
Fabricius KE and De'ath AG (2004) Identifying ecological change and its causes: a case study on coral reefs. Ecological Applications. 14: 1448-1465.

local : 11068/6824

Water clarity and water quality, catchment to reef, Great Barrier Reef

uri : https://apps.aims.gov.au/metadata/view/273fd55d-84d3-4781-a193-ab58695cb4c4

Identifiers
  • global : 1f06bbe8-2031-4250-b9ce-85c6c9044b1d