Data

Georeferenced benthic photo quadrats and benthic cover data derived from a time series of transect surveys for the Eastern Banks, Moreton Bay, Australia, 2004-2025

The University of Queensland
Associate Professor Chris Roelfsema (Aggregated by) Associate Professor Chris Roelfsema (Aggregated by) Dr Dylan Cowley (Aggregated by) Dr Dylan Cowley (Aggregated by) Miss Kathryn Markey (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/9383138&rft.title=Georeferenced benthic photo quadrats and benthic cover data derived from a time series of transect surveys for the Eastern Banks, Moreton Bay, Australia, 2004-2025&rft.identifier=RDM ID: fd54c96e-f247-4dc7-9b1d-39a02d76614d&rft.publisher=The University of Queensland&rft.description=Data Purpose: Georeferenced underwater photo quadrats were collected with the purpose of determining benthic composition for use in ecological assessment and calibration and validation of benthic habitat maps derived from remote sensing satellite or airborne imagery. Transect location, direction and depth were chosen to characterise the variation of benthic cover types on the Eastern Banks in Moreton Bay. The interval between photo quadrats along the transects was chosen to reflect the resolution of the satellite image data types used. Data Collection: In short, during the photo quadrat surveys, a snorkeller captured photo quadrats of a set area and interval along a transect. Afterwards, photos were assigned a GPS coordinate and processed in ReefCloud (AIMS, 2024) for benthic composition. Snorkellers conducted these surveys at 1 – 2 m depth along a pre-determined transect of ~250 – 1000 m, varying depending on heterogeneity of the area covered. The horizontal distance between photo quadrats was estimated by the surveyor counting fin kicks, and corresponded to a surface distance of ~2 – 4 m. A plumb line was used to standardise the camera distance from the benthos and maintain an image footprint of ~ 1m x 1m. The surveyor would tow a floating GPS at the surface, which was logging its position every 2 seconds. Data Processing: The coordinates of each photo quadrat were synchronised based on the timestamp of the photo quadrat and of the GPS, using specialised software (GPS-Photo by Josh Passenger: Simple tool for positioning photos along GPS tracks using linear interpolation). The coordinates of each photo quadrat were interpolated by finding the closest corresponding GPS coordinate within a set time interval (2 seconds) before and after the photo quadrat was captured. Benthic composition data was extracted using trained machine point annotations in ReefCloud (AIMS, 2024) using a labelset guide which has been provided with the benthic data. Confusion matrices were generated and are also provided alongside benthic data. Data Files Included: - Georeferenced benthic photo quadrats (2004 - 2025)- Georeferenced benthic cover data (2007 -2025) - Confusion matrix - Labelset guides - Metadata document&rft.creator=Associate Professor Chris Roelfsema&rft.creator=Associate Professor Chris Roelfsema&rft.creator=Dr Dylan Cowley&rft.creator=Dr Dylan Cowley&rft.creator=Miss Kathryn Markey&rft.creator=Miss Kathryn Markey&rft.date=2026&rft_rights= https://guides.library.uq.edu.au/deposit-your-data/license-reuse-data-agreement&rft_subject=eng&rft_subject=Quadrat&rft_subject=Transect&rft_subject=Benthic zone&rft_subject=Aerial photography&rft_subject=Global Positioning System&rft_subject=Satellite&rft_subject=Satellite imagery&rft_subject=Calibration&rft_subject=Photogrammetry and remote sensing&rft_subject=Geomatic engineering&rft_subject=ENGINEERING&rft_subject=Ecological applications&rft_subject=ENVIRONMENTAL SCIENCES&rft.type=dataset&rft.language=English Access the data

Contact Information

[email protected]
School of the Environment

Full description

Data Purpose: Georeferenced underwater photo quadrats were collected with the purpose of determining benthic composition for use in ecological assessment and calibration and validation of benthic habitat maps derived from remote sensing satellite or airborne imagery. Transect location, direction and depth were chosen to characterise the variation of benthic cover types on the Eastern Banks in Moreton Bay. The interval between photo quadrats along the transects was chosen to reflect the resolution of the satellite image data types used. Data Collection: In short, during the photo quadrat surveys, a snorkeller captured photo quadrats of a set area and interval along a transect. Afterwards, photos were assigned a GPS coordinate and processed in ReefCloud (AIMS, 2024) for benthic composition. Snorkellers conducted these surveys at 1 – 2 m depth along a pre-determined transect of ~250 – 1000 m, varying depending on heterogeneity of the area covered. The horizontal distance between photo quadrats was estimated by the surveyor counting fin kicks, and corresponded to a surface distance of ~2 – 4 m. A plumb line was used to standardise the camera distance from the benthos and maintain an image footprint of ~ 1m x 1m. The surveyor would tow a floating GPS at the surface, which was logging its position every 2 seconds. Data Processing: The coordinates of each photo quadrat were synchronised based on the timestamp of the photo quadrat and of the GPS, using specialised software (GPS-Photo by Josh Passenger: Simple tool for positioning photos along GPS tracks using linear interpolation). The coordinates of each photo quadrat were interpolated by finding the closest corresponding GPS coordinate within a set time interval (2 seconds) before and after the photo quadrat was captured. Benthic composition data was extracted using trained machine point annotations in ReefCloud (AIMS, 2024) using a labelset guide which has been provided with the benthic data. Confusion matrices were generated and are also provided alongside benthic data. Data Files Included: - Georeferenced benthic photo quadrats (2004 - 2025)- Georeferenced benthic cover data (2007 -2025) - Confusion matrix - Labelset guides - Metadata document

Issued: 2026

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Identifiers
ACN 633 798 857