Data

Genome and transcriptome data for bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329

The University of Queensland
Associate Professor Cheong Xin Chan (Aggregated by) Associate Professor Cheong Xin Chan (Aggregated by) Dr Katherine Dougan (Aggregated by) Dr Katherine Dougan (Aggregated by) Mr Yibi Chen (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/bc851b7&rft.title=Genome and transcriptome data for bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329&rft.identifier=10.48610/bc851b7&rft.publisher=The University of Queensland&rft.description=De novo assembled genome sequences, structural annotation of the genome, predicted protein-coding genes, predicted protein sequences, and de novo assembled transcriptome from the bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329Pcordatum_genes_CDS_v1_fasta.gz - Predicted protein-coding gene sequencesPcordatum_genes_PROT_v1_fasta.gz - Predicted protein sequencesPcordatum_genome_ANNOT_v1_gff3.gz - Structural annotation of assembled genomePcordatum_genome_ASSEMBLY_v1_fasta.gz - De novo assembled genome sequencesPcordatum_transcriptome_v1_fasta.gz - De novo assembled transcriptome sequences&rft.creator=Associate Professor Cheong Xin Chan&rft.creator=Associate Professor Cheong Xin Chan&rft.creator=Dr Katherine Dougan&rft.creator=Dr Katherine Dougan&rft.creator=Mr Yibi Chen&rft.creator=Mr Yibi Chen&rft.creator=Mr Yibi Chen&rft.creator=Mr Yibi Chen&rft.creator=Ms Sarah Shah&rft.creator=Ms Sarah Shah&rft.creator=Ms Sarah Shah&rft.date=2023&rft_rights= http://guides.library.uq.edu.au/deposit_your_data/terms_and_conditions&rft_subject=eng&rft_subject=microalgae&rft_subject=dinoflagellate&rft_subject=harmful algal bloom&rft_subject=genome&rft_subject=transcriptome&rft_subject=gene&rft_subject=protein&rft_subject=Genomics and transcriptomics&rft_subject=Bioinformatics and computational biology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Phycology (incl. marine grasses)&rft_subject=Plant biology&rft_subject=Evolutionary biology&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Contact Information

c.chan1@uq.edu.au

Full description

De novo assembled genome sequences, structural annotation of the genome, predicted protein-coding genes, predicted protein sequences, and de novo assembled transcriptome from the bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329Pcordatum_genes_CDS_v1_fasta.gz - Predicted protein-coding gene sequencesPcordatum_genes_PROT_v1_fasta.gz - Predicted protein sequencesPcordatum_genome_ANNOT_v1_gff3.gz - Structural annotation of assembled genomePcordatum_genome_ASSEMBLY_v1_fasta.gz - De novo assembled genome sequencesPcordatum_transcriptome_v1_fasta.gz - De novo assembled transcriptome sequences

Issued: 09 06 2023

Data time period: 03 2019 to 30 11 2021

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Related Grants and Projects

Subjects
Biological Sciences | Bioinformatics and Computational Biology | Evolutionary Biology | Genomics and Transcriptomics | Phycology (Incl. Marine Grasses) | Plant Biology | dinoflagellate | eng | gene | genome | harmful algal bloom | microalgae | protein | transcriptome |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
Multi-omics analysis reveals the molecular response to heat stress in a “red tide” dinoflagellate

local : UQ:d0ae188

Dougan, Katherine E., Deng, Zhi-Luo, Wöhlbrand, Lars, Reuse, Carsten, Bunk, Boyke, Chen, Yibi, Hartlich, Juliane, Hiller, Karsten, John, Uwe, Kalvelage, Jana, Mansky, Johannes, Neumann-Schaal, Meina, Overmann, Jörg, Petersen, Jörn, Sanchez-Garcia, Selene, Schmidt-Hohagen, Kerstin, Shah, Sarah, Spröer, Cathrin, Sztajer, Helena, Wang, Hui, Bhattacharya, Debashish, Rabus, Ralf, Jahn, Dieter, Chan, Cheong Xin and Wagner-Döbler, Irene (2023). Multi-omics analysis reveals the molecular response to heat stress in a “red tide” dinoflagellate. Genome Biology, 24 (1) 265, 265. doi: 10.1186/s13059-023-03107-4

Research Data Collections

local : UQ:289097

Identifiers