Data

Genome and transcriptome data for bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329

The University of Queensland
Dr Cheong Xin Chan (Author) Dr Katherine Dougan (Author) Mr Yibi Chen (Author) Ms Sarah Shah (Author) Ms Sarah Shah (Author)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/bc851b7&rft.title=Genome and transcriptome data for bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329&rft.identifier=10.48610/bc851b7&rft.publisher=The University of Queensland&rft.description=De novo assembled genome sequences, structural annotation of the genome, predicted protein-coding genes, predicted protein sequences, and de novo assembled transcriptome from the bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329Pcordatum_genes_CDS_v1_fasta.gz - Predicted protein-coding gene sequencesPcordatum_genes_PROT_v1_fasta.gz - Predicted protein sequencesPcordatum_genome_ANNOT_v1_gff3.gz - Structural annotation of assembled genomePcordatum_genome_ASSEMBLY_v1_fasta.gz - De novo assembled genome sequencesPcordatum_transcriptome_v1_fasta.gz - De novo assembled transcriptome sequences&rft.creator=Dr Cheong Xin Chan&rft.creator=Dr Katherine Dougan&rft.creator=Mr Yibi Chen&rft.creator=Ms Sarah Shah&rft.creator=Ms Sarah Shah&rft.date=2023&rft.relation=https://espace.library.uq.edu.au/view/UQ:d0ae188&rft_subject=microalgae&rft_subject=dinoflagellate&rft_subject=harmful algal bloom&rft_subject=genome&rft_subject=transcriptome&rft_subject=gene&rft_subject=protein&rft.type=dataset&rft.language=English Access the data
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Contact Information

c.chan1@uq.edu.au

Full description

De novo assembled genome sequences, structural annotation of the genome, predicted protein-coding genes, predicted protein sequences, and de novo assembled transcriptome from the bloom-forming dinoflagellate Prorocentrum cordatum CCMP1329Pcordatum_genes_CDS_v1_fasta.gz - Predicted protein-coding gene sequencesPcordatum_genes_PROT_v1_fasta.gz - Predicted protein sequencesPcordatum_genome_ANNOT_v1_gff3.gz - Structural annotation of assembled genomePcordatum_genome_ASSEMBLY_v1_fasta.gz - De novo assembled genome sequencesPcordatum_transcriptome_v1_fasta.gz - De novo assembled transcriptome sequences

Issued: 09 06 2023

Data time period: 03 2019 to 30 11 2021

This dataset is part of a larger collection

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Related Publications

  • Associated with Multi-omics analysis reveals the molecular response to heat stress in a "red tide" dinoflagellate
    uri : espace.library.uq.edu.au/view/UQ:d0ae188

    Dougan, Katherine E., Deng, Zhi-Luo, Wöhlbrand, Lars, Reuse, Carsten, Bunk, Boyke, Chen, Yibi, Hartlich, Juliane, Hiller, Karsten, John, Uwe, Kalvelage, Jana, Mansky, Johannes, Neumann-Schaal, Meina, Overmann, Jörg, Petersen, Jörn, Sanchez-Garcia, Selene, Schmidt-Hohagen, Kerstin, Shah, Sarah, Spröer, Cathrin, Sztajer, Helena, Wang, Hui, Bhattacharya, Debashish, Rabus, Ralf, Jahn, Dieter, Chan, Cheong Xin and Wagner-Döbler, Irene (2023). Multi-omics analysis reveals the molecular response to heat stress in a "red tide" dinoflagellate. Genome Biology, 24 (1) 265, 265. doi: 10.1186/s13059-023-03107-4

  • Associated with Multi-omics analysis reveals the molecular response to heat stress in a “red tide” dinoflagellate
    doi : 10.1186/S13059-023-03107-4

    Dougan, Katherine E., Deng, Zhi-Luo, Wöhlbrand, Lars, Reuse, Carsten, Bunk, Boyke, Chen, Yibi, Hartlich, Juliane, Hiller, Karsten, John, Uwe, Kalvelage, Jana, Mansky, Johannes, Neumann-Schaal, Meina, Overmann, Jörg, Petersen, Jörn, Sanchez-Garcia, Selene, Schmidt-Hohagen, Kerstin, Shah, Sarah, Spröer, Cathrin, Sztajer, Helena, Wang, Hui, Bhattacharya, Debashish, Rabus, Ralf, Jahn, Dieter, Chan, Cheong Xin and Wagner-Döbler, Irene (2023). Multi-omics analysis reveals the molecular response to heat stress in a "red tide" dinoflagellate. Genome Biology, 24 (1) 265, 265. doi: 10.1186/s13059-023-03107-4

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Subjects
dinoflagellate | gene | genome | harmful algal bloom | microalgae | protein | transcriptome |

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