Data

EcoRRAP oceanographic logger data

Name: EcoRRAP oceanographic logger data
Published: 2026

Australian Institute of Marine Science

Australian Institute of Marine Science (AIMS)

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These loggers measured salinity, temperature, depth, light (PAR) and currents (current profiles and surface waves). The loggers were attached to a 1m2 flat steel frame affixed to the seafloor so that the instrument sensors were approximately 50cm from the bottom. A Spotter wave buoy was also deployed adjacent to each main-reef instrument array. These measured surface wave and temperature (at 5m deep and the seafloor) data, as well as calculated wind speeds. Some later Spotter models also measured barometric pressure. The Spotter temperature data timeseries are typically shorter than the wave timeseries.Temperature sensors and tilt current meters were further deployed at many other zones. Exact deployment details are described in the “202411_EcoRRAP_logger_metadata_record.xls” spreadsheet attached. Temperature loggers were generally deployed at one zone type per reef. Where a zone type is a combination of reef aspect and depth. For example, Front1 shallow and Front1 deep are different zone types, while Front1 shallow and Front2 shallow are the same zone type (i.e. both Front sites at the same depth). Smaller reefs and reefs with presumably more homogenous temperatures had lower numbers of site types monitored for temperature due to limited numbers of sensors available. Tilt current meters were deployed at each zone at different time points throughout the sampling period. These deployments were typically for 2 – 3 months. Instruments used:The below is a list of logger types used for the different parameters. Refer to the manufacturer’s websites for further product information and user guides. Loggers were typically deployed with 10 minute sampling intervals. Wave measurements were conducted every two or three hours depending on instrument model to maximise deployment length.CTDs (conductivity / salinity, temperature and depth): Seabird Electronics SBE37: https://www.seabird.com/moored/sbe-37-sm-smp-smp-odo-microcat/family?productCategoryId=54627473786 Seabird Electronics SBE16 Plus: https://www.seabird.com/sbe-16plus-v2-seacat/product?id=60761421598Light (PAR): Licor light sensor (LI-192) attached to RBR solo3 logger: https://rbr-global.com/products/compact-loggers/rbrsolo-do-tu-par/ RBR solo PAR: https://rbr-global.com/products/compact-loggers/rbrsolo-par-rad/ Light bio-wiper: zebratech - https://www.zebra-tech.co.nz/hydro-wiper/Depth: RBR solo3 D - https://rbr-global.com/products/compact-loggers/rbrsolo-d/Temperature: RBR solo3 T - https://rbr-global.com/products/compact-loggers/rbrsolo-t-2/ Seabird Electronics SBE39: https://www.seabird.com/moored/sbe-39plus-temperature-depth-recorder/family?productCategoryId=54627473774Acoustic currents and waves: Nortek Signature1000: https://www.nortekgroup.com/products/signature-1000 Nortek AWAC 600kHz: https://www.nortekgroup.com/products/awac-600-khz Nortek Aquadopp profiler: https://observator.com/products/nortek-aquadopp-profiler/ Teledyne RDI ADCP: https://www.teledynemarine.com/en-us/products/Pages/workhorse-sentinel-adcp.aspxTilt current meter: Marotte: https://www.marinegeophysics.com.au/current-meter/Wave buoy and temperature string: Sofar Ocean Spotter smart mooring: https://www.sofarocean.com/posts/introducing-spotter-smart-mooringThe file structure of processed data are organised by parameter and then collection fieldtrip (date and then AIMS fieldtrip numbers). Typically a collection fieldtrip visited one or two of our EcoRRAP regions in the Torres strait, Northern, Central and Southern Great Barrier Reef. So as an example, temperature data from PAOR_FL1S between 23/1/21 – 30/3/21, retrieved on fieldtrip 7626 (the first data row in the attached deployment metadata spreadsheet), can be found in the folder “CTD_DATA \ 202103_7626_Central_GBR” being a combination of parameter (CTD), collection fieldtrip date (March 2021), AIMS fieldtrip number (7626) and region (Central GBR).Maintenance and Update Frequency: annuallyStatement: The majority of loggers are not equipped with telemetry, so data needs to be manually retrieved upon collection. The exception to this is the Spotter wave buoys which transmit data in near real time. On collection trips logger data is recovered and deployment metadata is managed via a dedicated Microsoft Access database. The data is backed up on the internal AIMS server, and the AIMS Oceanographic team applies QA / QC tools to the data following standard procedures (IMOS Matlab toolbox: https://github.com/aodn/imos-toolbox/wiki). All processed data are output as NetCDF files (.nc) in UTC time. Column headers, parameters and units are all standard as per the toolbox output. All temperature sensors are run in a water bath with a recently calibrated Seabird CTD both pre- and post-deployment to account for instrument offsets and drift. Summary statistics files are also produced (as .csv) for ease of use in statistical models. These are output in local time (GMT+10). Refer to attached “ecorrap_stats_description.txt” for column header and unit descriptions, found in the AIMS_EcoRRAP_Oceanography_CSV_FILES.zip. Data collection is ongoing and will be updated iteratively and logged here. 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southlimit=-23.9003; eastlimit=152.39342; northlimit=-23.9003&rft_rights=Creative Commons Attribution-NonCommercial 3.0 Australia License http://creativecommons.org/licenses/by-nc/3.0/au/&rft_rights=Use Limitation: All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2023). EcoRRAP oceanographic logger data. https://apps.aims.gov.au/metadata/view/778cc4e3-7979-4601-8fdf-772f345d8956, accessed[date-of-access].&rft_subject=oceans&rft_subject=Current speed in the water body&rft_subject=Specific electrical conductivity of the water body&rft_subject=Depth of observation or sample collection&rft_subject=Temperature of the water body&rft_subject=Practical salinity of the water body&rft_subject=Downwelling vector irradiance as photons (PAR wavelengths) in the water body&rft_subject=Current direction in the water body&rft.type=dataset&rft.language=English Access the data

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Creative Commons Attribution-NonCommercial 3.0 Australia License
http://creativecommons.org/licenses/by-nc/3.0/au/

Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2023). EcoRRAP oceanographic logger data. https://apps.aims.gov.au/metadata/view/778cc4e3-7979-4601-8fdf-772f345d8956, accessed[date-of-access]".

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Full description

Oceanographic loggers have been deployed continuously at our EcoRRAP monitoring sites since inception in 2021. Deployments are typically for 12 months, with loggers exchanged and data retrieved during the annual monitoring expeditions. Data have been collected to provide explanatory information for ecological datasets, and for model parameterisation.

At the main reef per cluster (i.e. Masig Island, Lizard Island, Moore Reef, Pelorus Island, Davies Reef, Mial Island and Heron Island) an array of loggers was deployed at one of the Front Deep zones. These loggers measured salinity, temperature, depth, light (PAR) and currents (current profiles and surface waves). The loggers were attached to a 1m2 flat steel frame affixed to the seafloor so that the instrument sensors were approximately 50cm from the bottom. A Spotter wave buoy was also deployed adjacent to each main-reef instrument array. These measured surface wave and temperature (at 5m deep and the seafloor) data, as well as calculated wind speeds. Some later Spotter models also measured barometric pressure. The Spotter temperature data timeseries are typically shorter than the wave timeseries.

Temperature sensors and tilt current meters were further deployed at many other zones. Exact deployment details are described in the “202411_EcoRRAP_logger_metadata_record.xls” spreadsheet attached. Temperature loggers were generally deployed at one zone type per reef. Where a zone type is a combination of reef aspect and depth. For example, Front1 shallow and Front1 deep are different zone types, while Front1 shallow and Front2 shallow are the same zone type (i.e. both Front sites at the same depth). Smaller reefs and reefs with presumably more homogenous temperatures had lower numbers of site types monitored for temperature due to limited numbers of sensors available. Tilt current meters were deployed at each zone at different time points throughout the sampling period. These deployments were typically for 2 – 3 months.

Instruments used:

The below is a list of logger types used for the different parameters. Refer to the manufacturer’s websites for further product information and user guides. Loggers were typically deployed with 10 minute sampling intervals. Wave measurements were conducted every two or three hours depending on instrument model to maximise deployment length.

CTDs (conductivity / salinity, temperature and depth):

    Seabird Electronics SBE37: https://www.seabird.com/moored/sbe-37-sm-smp-smp-odo-microcat/family?productCategoryId=54627473786

    Seabird Electronics SBE16 Plus: https://www.seabird.com/sbe-16plus-v2-seacat/product?id=60761421598

Light (PAR):

    Licor light sensor (LI-192) attached to RBR solo3 logger: https://rbr-global.com/products/compact-loggers/rbrsolo-do-tu-par/

    RBR solo PAR: https://rbr-global.com/products/compact-loggers/rbrsolo-par-rad/

    Light bio-wiper: zebratech - https://www.zebra-tech.co.nz/hydro-wiper/

Depth:

    RBR solo3 D - https://rbr-global.com/products/compact-loggers/rbrsolo-d/

Temperature:

    RBR solo3 T - https://rbr-global.com/products/compact-loggers/rbrsolo-t-2/

    Seabird Electronics SBE39: https://www.seabird.com/moored/sbe-39plus-temperature-depth-recorder/family?productCategoryId=54627473774

Acoustic currents and waves:

    Nortek Signature1000: https://www.nortekgroup.com/products/signature-1000

    Nortek AWAC 600kHz: https://www.nortekgroup.com/products/awac-600-khz

    Nortek Aquadopp profiler: https://observator.com/products/nortek-aquadopp-profiler/

    Teledyne RDI ADCP: https://www.teledynemarine.com/en-us/products/Pages/workhorse-sentinel-adcp.aspx

Tilt current meter:

    Marotte: https://www.marinegeophysics.com.au/current-meter/

Wave buoy and temperature string:

    Sofar Ocean Spotter smart mooring: https://www.sofarocean.com/posts/introducing-spotter-smart-mooring

The file structure of processed data are organised by parameter and then collection fieldtrip (date and then AIMS fieldtrip numbers). Typically a collection fieldtrip visited one or two of our EcoRRAP regions in the Torres strait, Northern, Central and Southern Great Barrier Reef.

So as an example, temperature data from PAOR_FL1S between 23/1/21 – 30/3/21, retrieved on fieldtrip 7626 (the first data row in the attached deployment metadata spreadsheet), can be found in the folder “CTD_DATA \ 202103_7626_Central_GBR” being a combination of parameter (CTD), collection fieldtrip date (March 2021), AIMS fieldtrip number (7626) and region (Central GBR).

Lineage

Maintenance and Update Frequency: annually

Statement: The majority of loggers are not equipped with telemetry, so data needs to be manually retrieved upon collection. The exception to this is the Spotter wave buoys which transmit data in near real time. On collection trips logger data is recovered and deployment metadata is managed via a dedicated Microsoft Access database. The data is backed up on the internal AIMS server, and the AIMS Oceanographic team applies QA / QC tools to the data following standard procedures (IMOS Matlab toolbox: https://github.com/aodn/imos-toolbox/wiki). All processed data are output as NetCDF files (.nc) in UTC time. Column headers, parameters and units are all standard as per the toolbox output. All temperature sensors are run in a water bath with a recently calibrated Seabird CTD both pre- and post-deployment to account for instrument offsets and drift. Summary statistics files are also produced (as .csv) for ease of use in statistical models. These are output in local time (GMT+10). Refer to attached “ecorrap_stats_description.txt” for column header and unit descriptions, found in the AIMS_EcoRRAP_Oceanography_CSV_FILES.zip. Data collection is ongoing and will be updated iteratively and logged here. First release of data occured on 17/01/2025 for data up to 11/2024.

Notes

Credit
Australian Institute of Marine Science (AIMS), Australia

Modified: 18 09 2026

This dataset is part of a larger collection

Click to explore relationships graph

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text: westlimit=146.49924; southlimit=-18.5391; eastlimit=146.49924; northlimit=-18.5391

text: westlimit=146.48909; southlimit=-18.54104; eastlimit=146.48909; northlimit=-18.54104

text: westlimit=146.49924; southlimit=-18.5391; eastlimit=146.49924; northlimit=-18.5391

text: westlimit=146.49895; southlimit=-18.53953; eastlimit=146.49895; northlimit=-18.53953

text: westlimit=146.49893; southlimit=-18.54003; eastlimit=146.49893; northlimit=-18.54003

text: westlimit=146.49924; southlimit=-18.5391; eastlimit=146.49924; northlimit=-18.5391

text: westlimit=147.660733; southlimit=-18.823133; eastlimit=147.660733; northlimit=-18.823133