Data

EcoRRAP Coral Demographic Data

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
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Colony segments were then transferred to the corresponding orthomosaic for the next time point and segments were refined to align with coral colony edges. Growth is recorded here as change in planar area of a colony between time points. This dataset also contains colonies whose species identification has been verified in the field by a coral taxonomist as well as colonies that have been sampled for genetic purposes. Digitised taxa include table Acropora (where possible, A. hyacinthus and A. cytherea were identified to species level), corymbose Acropora (where possible, A. millepora and A. tenuis were identified to species level), digitiate Acropora (where possible, A. humilis and A. gemmifera were identified to species level), Pocillopora verrucosa, Pocillopora damicornis, Stylophora pistillata, massive Porites, Goniastrea (where possible, G. edwardsi and G. retiformis were identified to species level), and Platygyra. Data is available for each year of monitoring in the form of .csv and .shp files. 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While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2023). EcoRRAP Coral Demographic Data. https://apps.aims.gov.au/metadata/view/5d14f00f-6c24-43c1-b44e-70fe013d0757, accessed[date-of-access].&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data
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http://creativecommons.org/licenses/by-nc/3.0/au/

Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2023). EcoRRAP Coral Demographic Data. https://apps.aims.gov.au/metadata/view/5d14f00f-6c24-43c1-b44e-70fe013d0757, accessed[date-of-access]".

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Brief description

This dataset provides information on coral survival and growth for eleven taxa at EcoRRAP sites across the Great Barrier Reef and Torres Strait (see SOP #14: Reef monitoring sampling methods | AIMS). This dataset was generated through the segmentation of coral colonies on EcoRRAP orthomosaics (EcoRRAP Benthic Orthomosaics - AIMS) using the software TagLab. Colonies of specific taxa were identified and digitised on orthomosaics generated from the first year of monitoring. Digitisation was either conducted manually or through the use of an AI classifier followed by manual verification. Colony segments were then transferred to the corresponding orthomosaic for the next time point and segments were refined to align with coral colony edges. Growth is recorded here as change in planar area of a colony between time points. This dataset also contains colonies whose species identification has been verified in the field by a coral taxonomist as well as colonies that have been sampled for genetic purposes. Digitised taxa include table Acropora (where possible, A. hyacinthus and A. cytherea were identified to species level), corymbose Acropora (where possible, A. millepora and A. tenuis were identified to species level), digitiate Acropora (where possible, A. humilis and A. gemmifera were identified to species level), Pocillopora verrucosa, Pocillopora damicornis, Stylophora pistillata, massive Porites, Goniastrea (where possible, G. edwardsi and G. retiformis were identified to species level), and Platygyra. Data is available for each year of monitoring in the form of .csv and .shp files. These files are available as individual years as well as in a joined form that links individual coral colonies across all time points.

Lineage

Maintenance and Update Frequency: asNeeded

Notes

Credit
This data was collected by various members of EcoRRAP. We thank all team members, students, and volunteers for their efforts

Modified: 17 10 2024

This dataset is part of a larger collection

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Subjects
oceans |

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Other Information
Data example - first 20 rows of dataset

uri : https://api.aims.gov.au/data-v2.0/5d14f00f-6c24-43c1-b44e-70fe013d0757/files/Data_example.xlsx

Example shapefile with underlying orthomosaic

uri : https://api.aims.gov.au/data-v2.0/5d14f00f-6c24-43c1-b44e-70fe013d0757/files/Shapefile_example.png

global : fe9659f1-12d6-4acf-ab89-67acdd37efe5

Identifiers
  • global : 5d14f00f-6c24-43c1-b44e-70fe013d0757
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