Data

DeepHis2Exp

The University of Queensland
Dr Quan Nguyen (Aggregated by) Dr Quan Nguyen (Aggregated by) Mr Xiao Tan (Aggregated by) Mr Xiao Tan (Aggregated by) Mr Yuanhao Jiang (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/3e7a235&rft.title=DeepHis2Exp&rft.identifier=RDM ID: 036bb2e2-bcbc-4cfb-a34c-0b921b879292&rft.publisher=The University of Queensland&rft.description=We collected and uploaded six spatial transcriptomic datasets to this database. The collected datasets include a) human HER2-positive breast tumour ST data, b) 10x Genomics Visium data and Swarbrick’s Laboratory Visium data, c) the human cutaneous squamous cell carcinoma, d) skin cancer melanoma dataset, e) kidney cancer dataset, f) liver disease dataset. The collected datasets are used for benchmarking existing deep learning models which predict spot-level spatial gene expression from H&E images only.&rft.creator=Dr Quan Nguyen&rft.creator=Dr Quan Nguyen&rft.creator=Mr Xiao Tan&rft.creator=Mr Xiao Tan&rft.creator=Mr Yuanhao Jiang&rft.date=2024&rft_rights= https://guides.library.uq.edu.au/deposit-your-data/license-reuse-data-agreement&rft_subject=eng&rft_subject=Bioinformatics and computational biology&rft_subject=BIOLOGICAL SCIENCES&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Contact Information

[email protected]
Institute for Molecular Bioscience

Full description

We collected and uploaded six spatial transcriptomic datasets to this database. The collected datasets include a) human HER2-positive breast tumour ST data, b) 10x Genomics Visium data and Swarbrick’s Laboratory Visium data, c) the human cutaneous squamous cell carcinoma, d) skin cancer melanoma dataset, e) kidney cancer dataset, f) liver disease dataset. The collected datasets are used for benchmarking existing deep learning models which predict spot-level spatial gene expression from H&E images only.

Issued: 27 02 2024

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Related Grants and Projects

Related Websites

Subjects
Biological Sciences | Bioinformatics and Computational Biology | eng |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
Research Data Collections

local : UQ:289097

Identifiers