Data

The Cancer Genome Atlas NGS datasets - Australian Mirror

med.data.edu.au
A/Pr Jason Wong (Managed by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft.title=The Cancer Genome Atlas NGS datasets - Australian Mirror&rft.publisher=med.data.edu.au&rft.description=Next-generation sequencing (NGS) datasets from The Cancer Genome Atlas (TCGA - http://cancergenome.nih.gov/), includes mirrored data from CGHub (https://cghub.ucsc.edu/) and other processed data generated from original BAM files. The data has been generated by The Cancer Genome Atlas (TCGA) consortium and made available to researchers for use in their research projects in a largely unrestricted manner. The main goal for storing this data in Australia is to provide a mirror of the TCGA large sequencing datasets so that it can be operated on directly using state and national High Performance Computing (HPC) facilities and to ensure that the datasets are no unnecessarily re-download from the USA by different research groups.&rft.creator=Anonymous&rft.date=1970&rft_rights=&rft_subject=Cancer Genetics&rft_subject=MEDICAL AND HEALTH SCIENCES&rft_subject=ONCOLOGY AND CARCINOGENESIS&rft.type=dataset&rft.language=English Access the data

Please use the contact information below to request access to this data.

Contact Information

jason.wong@unsw.edu.au Information regarding access to the mirrored dataset can be obtained by contacting Dr Jason Wong.

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Licence & Rights:

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Access to the raw data is restricted by the dbGap authorized access. Essentially access is granted for laboratories after an application justifying the intended use for the data. See also https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?page=login
https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?page=login

Brief description

Next-generation sequencing (NGS) datasets from The Cancer Genome Atlas (TCGA - http://cancergenome.nih.gov/), includes mirrored data from CGHub (https://cghub.ucsc.edu/) and other processed data generated from original BAM files.

The data has been generated by The Cancer Genome Atlas (TCGA) consortium and made available to researchers for use in their research projects in a largely unrestricted manner.

The main goal for storing this data in Australia is to provide a mirror of the TCGA large sequencing datasets so that it can be operated on directly using state and national High Performance Computing (HPC) facilities and to ensure that the datasets are no unnecessarily re-download from the USA by different research groups.

This dataset is part of a larger collection

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Subjects
Cancer Genetics | Medical and Health Sciences | Oncology and Carcinogenesis |

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