Data

Venom on Ice - data collected from the CEAMARC voyage of the Aurora Australis, voyage 3 2007-2008

Australian Ocean Data Network
Fry, B.G. ; FRY, BRYAN GRIEG
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.aad.gov.au/metadata/records/CEAMARC_CASO_200708_V3_Venom&rft.title=Venom on Ice - data collected from the CEAMARC voyage of the Aurora Australis, voyage 3 2007-2008&rft.identifier=http://data.aad.gov.au/metadata/records/CEAMARC_CASO_200708_V3_Venom&rft.publisher=Australian Antarctic Data Centre&rft.description=Accompanying excel spreadsheet details the DNA samples taken and venom glands obtained and associated date/location/depth collection site data. Each specimen will be DNA barcoded using the diagnostic 600bp region of the mitochondrial COI gene and sequences lodged on GenBank. DNA barcoding will aid in evaluating the extent of cephalopod biodiversity including revealing cryptic species and phylogeographic structure. Confirmation of species identities is also essential as glands from multiple individuals will be required for detailed proteomic analysis of the proteins produced by the octopus posterior salivary glands. The chemical composition of the secretions will be determined through the application of multidisciplinary techniques, including cDNA library construction, mass spectrometry, molecular modelling and bioactivity testing. The studies will commence in 2008 and run for several years, being the major element in a PhD project run through Dr. Fry's laboratory. Data_Format Excel file with the following columns: Sample ID Diagnosis Description Other Ref Gland Storage Tissue Tissue Storage Voucher Preservation Images Order Family Genus Species Location Site Depth (start-stop) Latitude Longitude Date Time (UT) Capture Event Other InformationProgress Code: completedStatement: Date, depth, location quality excellent. 2018-09-25 - The original files was reformatted to fit OBIS/GBFI/IPT Biodiversity.AQ tracking standards, and a new datasheet CEAMARC_Venomous_animals2007_08.csv was created. The new dataset contains datasetID, occurrenceID, eventID, eventRemarks, locality, verbatimLatitude, verbatimLongitude, decimalLatitude, decimalLongitude, continent, countryCode, occurrenceStatus, organismQuantity, organismQuantityType, basisOfRecord, minimumDepthInMeters, maximumDepthInMeters, samplingProtocol, and associatedReferences. The lowest taxonomical rank of the species identified that could be determined is provided, after matched in WoRMS (World Register of Marine Species).&rft.creator=Fry, B.G. &rft.creator=FRY, BRYAN GRIEG &rft.date=2008&rft.coverage=westlimit=139.01488; southlimit=-67.07104; eastlimit=150.06479; northlimit=-62.757324&rft.coverage=westlimit=139.01488; southlimit=-67.07104; eastlimit=150.06479; northlimit=-62.757324&rft_rights=This metadata record is publicly available.&rft_rights=These data are publicly available for download from the provided URL. Copies of the referenced papers are available for download to AAD Staff Only.&rft_rights= https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=CEAMARC_CASO_200708_V3_Venom when using these data. http://creativecommons.org/licenses/by/4.0/).&rft_rights=Portable Network Graphic&rft_rights=https://i.creativecommons.org/l/by/3.0/88x31.png&rft_rights=Creative Commons by Attribution logo&rft_rights=Attribution 4.0 International (CC BY 4.0)&rft_rights=Legal code for Creative Commons by Attribution 4.0 International license&rft_rights=Attribution 4.0 International (CC BY 4.0)&rft_rights= https://creativecommons.org/licenses/by/4.0/legalcode&rft_subject=biota&rft_subject=oceans&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > CNIDARIANS > ANTHOZOANS/HEXACORALS > SEA ANEMONES&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > MOLLUSKS > CEPHALOPODS&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > SEGMENTED WORMS (ANNELIDS) > BRISTLE WORMS&rft_subject=Venom&rft_subject=BOTTOM TRAWL&rft_subject=R/V AA > R/V Aurora Australis&rft_subject=AMD/AU&rft_subject=CEOS&rft_subject=AMD&rft_subject=OCEAN > SOUTHERN OCEAN&rft_subject=GEOGRAPHIC REGION > POLAR&rft.type=dataset&rft.language=English Access the data
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https://creativecommons.org/licenses/by/4.0/legalcode

This data set conforms to the CCBY Attribution License
(http://creativecommons.org/licenses/by/4.0/).

Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=CEAMARC_CASO_200708_V3_Venom when using these data.
http://creativecommons.org/licenses/by/4.0/).

Attribution 4.0 International (CC BY 4.0)

https://creativecommons.org/licenses/by/4.0/legalcode

This metadata record is publicly available.

These data are publicly available for download from the provided URL. Copies of the referenced papers are available for download to AAD Staff Only.

Portable Network Graphic

https://i.creativecommons.org/l/by/3.0/88x31.png

Creative Commons by Attribution logo

Attribution 4.0 International (CC BY 4.0)

Legal code for Creative Commons by Attribution 4.0 International license

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Brief description

Accompanying excel spreadsheet details the DNA samples taken and venom glands obtained and associated date/location/depth collection site data. Each specimen will be DNA barcoded using the diagnostic 600bp region of the mitochondrial COI gene and sequences lodged on GenBank. DNA barcoding will aid in evaluating the extent of cephalopod biodiversity including revealing cryptic species and phylogeographic structure. Confirmation of species identities is also essential as glands from multiple individuals will be required for detailed proteomic analysis of the proteins produced by the octopus posterior salivary glands. The chemical composition of the secretions will be determined through the application of multidisciplinary techniques, including cDNA library construction, mass spectrometry, molecular modelling and bioactivity testing. The studies will commence in 2008 and run for several years, being the major element in a PhD project run through Dr. Fry's laboratory. Data_Format Excel file with the following columns: Sample ID Diagnosis Description Other Ref Gland Storage Tissue Tissue Storage Voucher Preservation Images Order Family Genus Species Location Site Depth (start-stop) Latitude Longitude Date Time (UT) Capture Event Other Information

Lineage

Progress Code: completed
Statement: Date, depth, location quality excellent. 2018-09-25 - The original files was reformatted to fit OBIS/GBFI/IPT Biodiversity.AQ tracking standards, and a new datasheet "CEAMARC_Venomous_animals2007_08.csv" was created. The new dataset contains datasetID, occurrenceID, eventID, eventRemarks, locality, verbatimLatitude, verbatimLongitude, decimalLatitude, decimalLongitude, continent, countryCode, occurrenceStatus, organismQuantity, organismQuantityType, basisOfRecord, minimumDepthInMeters, maximumDepthInMeters, samplingProtocol, and associatedReferences. The lowest taxonomical rank of the species identified that could be determined is provided, after matched in WoRMS (World Register of Marine Species).

Data time period: 2007-12-22 to 2008-01-08

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150.06479,-62.75732 150.06479,-67.07104 139.01488,-67.07104 139.01488,-62.75732 150.06479,-62.75732

144.539835,-64.914182

text: westlimit=139.01488; southlimit=-67.07104; eastlimit=150.06479; northlimit=-62.757324

Subjects
AMD | AMD/AU | BOTTOM TRAWL | CEOS | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > CNIDARIANS > ANTHOZOANS/HEXACORALS > SEA ANEMONES | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > MOLLUSKS > CEPHALOPODS | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > SEGMENTED WORMS (ANNELIDS) > BRISTLE WORMS | GEOGRAPHIC REGION > POLAR | OCEAN > SOUTHERN OCEAN | R/V AA > R/V Aurora Australis | Venom | biota | oceans |

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Other Information
Download point for the excel spreadsheet (GET DATA)

uri : https://data.aad.gov.au/eds/4764/download

Download point for the referenced papers - AAD Staff Only (VIEW RELATED INFORMATION > PUBLICATIONS)

uri : https://data.aad.gov.au/eds/4765/download

Identifiers
  • global : CEAMARC_CASO_200708_V3_Venom
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