Data

Transcriptomics of chickpea resistant genotypes to Phytophthora medicaginis during the biotrophic-to-necrotrophic shift

Western Sydney University
Coles, Donovin ; Bithell, Sean L ; Plett, Krista L ; Plett, Jonathan
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26183/8mhr-7n58&rft.title=Transcriptomics of chickpea resistant genotypes to Phytophthora medicaginis during the biotrophic-to-necrotrophic shift&rft.identifier=10.26183/8mhr-7n58&rft.publisher=Western Sydney University&rft.description=RNA-seq profiling roots of two chickpea parents, the chickpea cultivar Yorker A, and a chickpea x Cicer echinospermum backcross derivative, 04067-81-2-1-1-(B) (04067-(B)), and their progeny D09024B>F6>040 (D09024B) and D09024A>F6>015 (D09024A) at 12, 24, and 72 hours post Phytophthora mediacginis challenge. 124 raw Illumina paired-end FASTQ files (Metatranscriptome sequencing) 1 Metadata file 2 processed files (raw and normalised counts) &rft.creator=Coles, Donovin &rft.creator=Bithell, Sean L &rft.creator=Plett, Krista L &rft.creator=Plett, Jonathan &rft.date=2025&rft.coverage=150.751547,-33.604564 150.759789,-33.606709 150.781768,-33.637728 150.720123,-33.617431 150.719092,-33.608853 150.726304,-33.603277 150.73386,-33.602276 150.743132,-33.611141 150.751547,-33.604564&rft.coverage=Hawkesbury Institute for the Environment, Western Sydney University (Richmond, NSW, Australia).&rft_rights=Copyright Western Sydney University&rft_rights=CC BY-NC-ND 4.0: Attribution-Noncommercial-No Derivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0&rft_subject=SDG 15 Life on Land&rft_subject=SDG 2 Zero Hunger&rft_subject=Cicer arietinum&rft_subject=pathology&rft_subject=sustainable agriculture&rft_subject=root disease&rft_subject=multi-omic analysis&rft_subject=quantitative resistance&rft_subject=crop breeding&rft_subject=Crop and pasture biochemistry and physiology&rft_subject=Crop and pasture production&rft_subject=AGRICULTURAL, VETERINARY AND FOOD SCIENCES&rft_subject=Crop and pasture protection (incl. pests, diseases and weeds)&rft_subject=Grain legumes&rft_subject=Grains and seeds&rft_subject=PLANT PRODUCTION AND PLANT PRIMARY PRODUCTS&rft.type=dataset&rft.language=English Access the data
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Copyright Western Sydney University

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RNA-seq profiling roots of two chickpea parents, the chickpea cultivar Yorker A, and a chickpea x Cicer echinospermum backcross derivative, 04067-81-2-1-1-(B) (04067-(B)), and their progeny D09024B>F6>040 (D09024B) and D09024A>F6>015 (D09024A) at 12, 24, and 72 hours post Phytophthora mediacginis challenge. 124 raw Illumina paired-end FASTQ files (Metatranscriptome sequencing) 1 Metadata file 2 processed files (raw and normalised counts)

Created: 2025-10-30

Data time period: 2019 to 31 12 2022

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150.75155,-33.60456 150.75979,-33.60671 150.78177,-33.63773 150.72012,-33.61743 150.71909,-33.60885 150.7263,-33.60328 150.73386,-33.60228 150.74313,-33.61114 150.75155,-33.60456

150.75043,-33.620002

text: Hawkesbury Institute for the Environment, Western Sydney University (Richmond, NSW, Australia).

Subjects
Agricultural, Veterinary and Food Sciences | Cicer arietinum | Crop and Pasture Biochemistry and Physiology | Crop and Pasture Production | Crop and Pasture Protection (Incl. Pests, Diseases and Weeds) | Grain Legumes | Grains and Seeds | Plant Production and Plant Primary Products | SDG 15 Life on Land | SDG 2 Zero Hunger | crop breeding | multi-omic analysis | pathology | quantitative resistance | root disease | sustainable agriculture |

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Identifiers
  • DOI : 10.26183/8MHR-7N58
  • Local : research-data.westernsydney.edu.au/published/ecc4a0a0b54711f09b2b7f1c32516ef9