Data

The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome

Commonwealth Scientific and Industrial Research Organisation
Gissi, Francesca ; Reichelt-Brushett, Amanda ; Chariton, Anthony ; Stauber, Jenny ; Greenfield, Paul ; Humphrey, Craig ; Salmon, Mat ; Stephenson, Sarah ; Creswell, Tom ; Jolley, Dianne
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/5cb58f09621db&rft.title=The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome&rft.identifier=https://doi.org/10.25919/5cb58f09621db&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=The data describes the microbiome community of the coral Acropora mucricata following exposure to nickel and copper (separately) for 4 days under controlled laboratory conditionsLineage: Amplicon libraries were prepared for sequencing using TruSeq PCR-free kit. The libraries were run as two separate Illumina® Miseq sequencing runs, 2x 250bp for 16SrDNA and 2x 150bp for 18SrDNA. Sequenced data were processed using a custom pipeline (Greenfield Hybrid Amplicon Pipeline, GHAP) which is based on USEARCH tools (Edgar, 2013). The pipeline is available at https://doi.org/10.4225/08/59f98560eba25. &rft.creator=Gissi, Francesca &rft.creator=Reichelt-Brushett, Amanda &rft.creator=Chariton, Anthony &rft.creator=Stauber, Jenny &rft.creator=Greenfield, Paul &rft.creator=Humphrey, Craig &rft.creator=Salmon, Mat &rft.creator=Stephenson, Sarah &rft.creator=Creswell, Tom &rft.creator=Jolley, Dianne &rft.date=2019&rft.edition=v2&rft_rights=CSIRO Data Licence https://research.csiro.au/dap/licences/csiro-data-licence/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2019.&rft_subject=Tropical ecotoxicology&rft_subject=Coral microbiome&rft_subject=DNA metabarcoding&rft_subject=16S rDNA&rft_subject=18S rDNA&rft_subject=Metals&rft_subject=Coral reefs&rft_subject=Other environmental sciences not elsewhere classified&rft_subject=Other environmental sciences&rft_subject=ENVIRONMENTAL SCIENCES&rft.type=dataset&rft.language=English Access the data
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The data describes the microbiome community of the coral Acropora mucricata following exposure to nickel and copper (separately) for 4 days under controlled laboratory conditions
Lineage: Amplicon libraries were prepared for sequencing using TruSeq PCR-free kit. The libraries were run as two separate Illumina® Miseq sequencing runs, 2x 250bp for 16SrDNA and 2x 150bp for 18SrDNA. Sequenced data were processed using a custom pipeline (Greenfield Hybrid Amplicon Pipeline, GHAP) which is based on USEARCH tools (Edgar, 2013). The pipeline is available at https://doi.org/10.4225/08/59f98560eba25.

Available: 2019-04-16

Data time period: 2016-06-01 to 2018-09-30

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Subjects
16S rDNA | 18S rDNA | Coral microbiome | Coral reefs | DNA metabarcoding | Environmental Sciences | Metals | Other Environmental Sciences | Other Environmental Sciences Not Elsewhere Classified | Tropical ecotoxicology |

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Identifiers
ACN 633 798 857