Data

The development of DNA markers to resolve uncertainties of seabird bycatch identification from longline fisheries in Australian waters

Australian Ocean Data Network
Polanowski, A., MacDonald, A., Double, M., Barrington, J.H., Wienecke, B. and McInnes, J. ; POLANOWSKI, ANDREA ; MACDONALD, ANNA ; DOUBLE, MIKE ; BARRINGTON, JOHNATHON H.S. ; WIENECKE, BARBARA ; MCINNES, JULIE
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.aad.gov.au/metadata/Genetic_identification_of_seabird_bycatch_Supp_Info&rft.title=The development of DNA markers to resolve uncertainties of seabird bycatch identification from longline fisheries in Australian waters&rft.identifier=http://data.aad.gov.au/metadata/Genetic_identification_of_seabird_bycatch_Supp_Info&rft.publisher=Australian Antarctic Data Centre&rft.description=Please refer to the manuscript - The development of DNA markers to resolve uncertainties of seabird bycatch identification from longline fisheries in Australian waters. - Supplementary Information FASTA files Custom reference DNA sequence databases for procellariiforms for each marker in FASTA format are available as Supporting Information (SuppInfo_COI_AP_reference_database.txt, SuppInfo_Cytb_AP_reference_database.txt and SuppInfo_CRBird_AP_reference_database.txt). DNA sequences obtained from 59 feathers samples from bycaught seabirds using COI_AP (n=19), Cytb_AP (n=59), CRBird_AP (n=54) markers in FASTA format is available as Supporting Information (SuppInfo_Bycatch_feather_sequences.txt). - Supplementary Table Table S1: Sample Information for the 99 reference samples obtained from museum collections, archived samples at the Australian Antarctic Division of the Department of Climate Change, Energy, the Environment and Water, and seabird bycatch specimens. Table S2: The number of sequences and unique haplotypes included in the curated reference databases for all procellariiform species, and the resolution of each marker for species identification, for each of three genetic markers: COI_AP, CRBird_AP and Cytb_AP. Table S3: Species resolution, and the number of reference DNA sequences (N seq) and unique haplotypes (N hap) for the three selected primer sets for the 36 listed procellariform speciesProgress Code: onGoing&rft.creator=Polanowski, A., MacDonald, A., Double, M., Barrington, J.H., Wienecke, B. and McInnes, J. &rft.creator=POLANOWSKI, ANDREA &rft.creator=MACDONALD, ANNA &rft.creator=DOUBLE, MIKE &rft.creator=BARRINGTON, JOHNATHON H.S. &rft.creator=WIENECKE, BARBARA &rft.creator=MCINNES, JULIE &rft.date=2024&rft.coverage=westlimit=69.96094; southlimit=-67.20403; eastlimit=161.32031; northlimit=-48.8487&rft.coverage=westlimit=69.96094; southlimit=-67.20403; eastlimit=161.32031; northlimit=-48.8487&rft_rights=This metadata record is publicly available.&rft_rights=These data are not yet publicly available for download.&rft_rights= https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=Genetic_identification_of_seabird_bycatch_Supp_Info when using these data. http://creativecommons.org/licenses/by/4.0/).&rft_rights=Portable Network Graphic&rft_rights=https://i.creativecommons.org/l/by/3.0/88x31.png&rft_rights=Creative Commons by Attribution logo&rft_rights=Attribution 4.0 International (CC BY 4.0)&rft_rights=Legal code for Creative Commons by Attribution 4.0 International license&rft_rights=Attribution 4.0 International (CC BY 4.0)&rft_rights= https://creativecommons.org/licenses/by/4.0/legalcode&rft_subject=biota&rft_subject=oceans&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > BIRDS > ALBATROSSES/PETRELS AND ALLIES&rft_subject=EARTH SCIENCE > OCEANS > AQUATIC SCIENCES > FISHERIES&rft_subject=EARTH SCIENCE > AGRICULTURE > AGRICULTURAL AQUATIC SCIENCES > FISHERIES&rft_subject=SEABIRD BYCATCH&rft_subject=GENETIC MARKERS&rft_subject=LONGLINE FISHERIES&rft_subject=ALBATROSSES AND PETRELS&rft_subject=THE SOUTHERN AND EASTERN SCALEFISH AND SHARK FISHERY (SESSF)&rft_subject=EASTERN TUNA BILLFISH FISHERY (ETBF)&rft_subject=ADS > Automated DNA Sequencer&rft_subject=LABORATORY > LABORATORY&rft_subject=Ships&rft_subject=AMD/AU&rft_subject=CEOS&rft_subject=AMD&rft_subject=OCEAN > SOUTHERN OCEAN&rft_subject=GEOGRAPHIC REGION > POLAR&rft.type=dataset&rft.language=English Access the data
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This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/).

Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=Genetic_identification_of_seabird_bycatch_Supp_Info when using these data.
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This metadata record is publicly available.

These data are not yet publicly available for download.

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Please refer to the manuscript - The development of DNA markers to resolve uncertainties of seabird bycatch identification from longline fisheries in Australian waters. - Supplementary Information FASTA files Custom reference DNA sequence databases for procellariiforms for each marker in FASTA format are available as Supporting Information (SuppInfo_COI_AP_reference_database.txt, SuppInfo_Cytb_AP_reference_database.txt and SuppInfo_CRBird_AP_reference_database.txt). DNA sequences obtained from 59 feathers samples from bycaught seabirds using COI_AP (n=19), Cytb_AP (n=59), CRBird_AP (n=54) markers in FASTA format is available as Supporting Information (SuppInfo_Bycatch_feather_sequences.txt). - Supplementary Table Table S1: Sample Information for the 99 reference samples obtained from museum collections, archived samples at the Australian Antarctic Division of the Department of Climate Change, Energy, the Environment and Water, and seabird bycatch specimens. Table S2: The number of sequences and unique haplotypes included in the curated reference databases for all procellariiform species, and the resolution of each marker for species identification, for each of three genetic markers: COI_AP, CRBird_AP and Cytb_AP. Table S3: Species resolution, and the number of reference DNA sequences (N seq) and unique haplotypes (N hap) for the three selected primer sets for the 36 listed procellariform species

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Progress Code: onGoing

Data time period: 2019-02-01 to 2022-12-30

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161.32031,-48.8487 161.32031,-67.20403 69.96094,-67.20403 69.96094,-48.8487 161.32031,-48.8487

115.640625,-58.026365

text: westlimit=69.96094; southlimit=-67.20403; eastlimit=161.32031; northlimit=-48.8487

Subjects
ADS > Automated DNA Sequencer | ALBATROSSES AND PETRELS | AMD | AMD/AU | CEOS | EARTH SCIENCE > AGRICULTURE > AGRICULTURAL AQUATIC SCIENCES > FISHERIES | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > BIRDS > ALBATROSSES/PETRELS AND ALLIES | EARTH SCIENCE > OCEANS > AQUATIC SCIENCES > FISHERIES | EASTERN TUNA BILLFISH FISHERY (ETBF) | GENETIC MARKERS | GEOGRAPHIC REGION > POLAR | LABORATORY > LABORATORY | LONGLINE FISHERIES | OCEAN > SOUTHERN OCEAN | SEABIRD BYCATCH | Ships | THE SOUTHERN AND EASTERN SCALEFISH AND SHARK FISHERY (SESSF) | biota | oceans |

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Citation reference for this metadata record and dataset. (GET DATA > DIRECT DOWNLOAD)

uri : https://data.aad.gov.au/eds/5993/download

Identifiers
  • global : Genetic_identification_of_seabird_bycatch_Supp_Info
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