Software

Source code, Integrated Species–Phenon Tree feature, Evolutionary Tree column, TimeScale Creator visualization platform

Also known as: Source code, Integrated Species–Phenon Tree
The Australian National University
Zehady, Abdullah Khan
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25911/5db66f7bc1935&rft.title=Source code, Integrated Species–Phenon Tree feature, Evolutionary Tree column, TimeScale Creator visualization platform&rft.identifier=10.25911/5db66f7bc1935&rft.publisher=ANU Data Commons, The Australian National University&rft.description=Readme.txt: TSCreator-7.4_05Apr2019_ISPRangeColumn.java: includes detailed data structures for evolutionary range points and ranges, and tree-drawing utility functions. TSCreator-7.4_05Apr2019_ISPImageGenerator.java: draws evolutionary tree data column and generates the final chart. TSCreator-7.4_05Apr2019_ISPMain.java: includes the main function which is the entry point to the software and spawns the Java process on a Java Virtual Machine. The TimeScale Creator software platform is freely available at https://timescalecreator.org/download/download.php, from where it can be downloaded as a Java archive (Jar) file or Windows executable (exe) file. Instructions to install TimeScale Creator and load datapacks are given in the following file included in this collection: Instructions_for_TSCreator_datapacks.pdf.Code for the Integrated Species–Phenon Tree: software which merges ancestor–descendant proposals for fossil morphotaxa (phena) with reconstructed phylogenies of lineages (species), to digitally visualize infraspecific diversity within species through deep time.&rft.creator=Zehady, Abdullah Khan &rft.date=2019&rft_rights=Creative Commons Licence (CC BY) is assigned to this data. Details of the licence can be found at http://creativecommons.org.au/licences.&rft_rights= http://creativecommons.org/licenses/by/3.0/au/deed.en&rft_subject=Computer Graphics&rft_subject=INFORMATION AND COMPUTING SCIENCES&rft_subject=ARTIFICIAL INTELLIGENCE AND IMAGE PROCESSING&rft_subject=Phylogeny and Comparative Analysis&rft_subject=BIOLOGICAL SCIENCES&rft_subject=EVOLUTIONARY BIOLOGY&rft_subject=Visualization&rft_subject=Phylogeny&rft.type=Computer Program&rft.language=English Access the software

Licence & Rights:

Open Licence view details
CC-BY

http://creativecommons.org/licenses/by/3.0/au/deed.en

Creative Commons Licence (CC BY) is assigned to this data. Details of the licence can be found at http://creativecommons.org.au/licences.

Access:

Open view details

Open Access

Contact Information

Postal Address:
Barry Fordham Research School of Earth Sciences Jaeger 8, Building 142, Mills Road Australian National University Canberra, ACT 2601 Australia

Street Address:
Ph: +61 (0)421 611 913

barry.fordham@anu.edu.au

Full description

Readme.txt: TSCreator-7.4_05Apr2019_ISPRangeColumn.java: includes detailed data structures for evolutionary range points and ranges, and tree-drawing utility functions. TSCreator-7.4_05Apr2019_ISPImageGenerator.java: draws evolutionary tree data column and generates the final chart. TSCreator-7.4_05Apr2019_ISPMain.java: includes the main function which is the entry point to the software and spawns the Java process on a Java Virtual Machine. The TimeScale Creator software platform is freely available at https://timescalecreator.org/download/download.php, from where it can be downloaded as a Java archive (Jar) file or Windows executable (exe) file. Instructions to install TimeScale Creator and load datapacks are given in the following file included in this collection: Instructions_for_TSCreator_datapacks.pdf.

Notes

5.
495 KB.

Significance statement

Code for the Integrated Species–Phenon Tree: software which merges ancestor–descendant proposals for fossil morphotaxa (phena) with reconstructed phylogenies of lineages (species), to digitally visualize infraspecific diversity within species through deep time.

Created: 2019-04-05

Data time period: 2015-07 to 2019-04-06

This dataset is part of a larger collection