Data

SNP dataset for the springtail Hypogastrura viatica

Monash University
Charlene Janion-Scheepers (Aggregated by) Helena Baird (Aggregated by) Katherine L. Moon (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26180/5d6f35ed1e4f7&rft.title=SNP dataset for the springtail Hypogastrura viatica&rft.identifier=https://doi.org/10.26180/5d6f35ed1e4f7&rft.publisher=Monash University&rft.description=Dataset of 7275 genome-wide Single Nucleotide Polymorphisms for the springtail Hypogastrura viatica in VCF format. An excel spreadsheet with associated metadata (sample collection details) is also supplied. The SNPs were generated at Diversity Arrays Technology (Canberra, Australia) using reduced representation next-generation sequencing, and subsequently quality filtered according to the methods outlined in the associated manuscript: Baird, H.P., Moon, K.L., Janion-Scheepers, C. & Chown, S.L. (2020) Springtail phylogeography highlights biosecurity risks of repeated invasions and intraregional transfers among remote islands. Evolutionary Applications, doi:10.1111/eva.12913&rft.creator=Charlene Janion-Scheepers&rft.creator=Charlene Janion-Scheepers&rft.creator=Helena Baird&rft.creator=Helena Baird&rft.creator=Katherine L. Moon&rft.creator=Katherine L. Moon&rft.creator=Steven Chown&rft.creator=Steven Chown&rft.date=2020&rft_rights=CC-BY-4.0&rft_subject=Springtail&rft_subject=Collembola&rft_subject=SNP&rft_subject=genomic&rft_subject=population genetics&rft_subject=Invasive Species&rft_subject=island biogeographic patterns&rft_subject=phylogeography&rft_subject=sub-Antarctic island&rft_subject=Invasive Species Ecology&rft_subject=Biogeography and Phylogeography&rft_subject=Population, Ecological and Evolutionary Genetics&rft.type=dataset&rft.language=English Access the data
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Dataset of 7275 genome-wide Single Nucleotide Polymorphisms for the springtail Hypogastrura viatica in VCF format. An excel spreadsheet with associated metadata (sample collection details) is also supplied. The SNPs were generated at Diversity Arrays Technology (Canberra, Australia) using reduced representation next-generation sequencing, and subsequently quality filtered according to the methods outlined in the associated manuscript: Baird, H.P., Moon, K.L., Janion-Scheepers, C. & Chown, S.L. (2020) Springtail phylogeography highlights biosecurity risks of repeated invasions and intraregional transfers among remote islands. Evolutionary Applications, doi:10.1111/eva.12913

Issued: 2019-09-10

Created: 2020-01-16

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Subjects
Biogeography and Phylogeography | Collembola | Invasive Species | Invasive Species Ecology | Population, Ecological and Evolutionary Genetics | SNP | Springtail | genomic | island biogeographic patterns | phylogeography | population genetics | sub-Antarctic island |

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