Data

Single-cell atlas of the Arabidopsis root tip - part 1

The University of Western Australia
Oliva, Marina ; Lister, Ryan
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.5281/zenodo.17411119&rft.title=Single-cell atlas of the Arabidopsis root tip - part 1&rft.identifier=10.5281/zenodo.17411119&rft.publisher=Zenodo&rft.description=Single-cell RNA-seq profiling of >275,000 Arabidopsis thaliana root tip cells across five ecotypes (Col-0, C24, Cvi-0, Ler, and Ws-2), three mutants (aba2-3, pyl11458, and scr-3), and multiple growth conditions, including two water potential stresses (drought). This record contains part (1/2) of the Seurat objects associated with the samples described in the manuscript ‘An environmentally responsive dichotomy in cell lineages of the root’.More precisely, it includes:- the main Col-0 root tip atlas (integrated_col_atlas.rds)- the atlas for Cvi-0 root tip cells (integrated_cvi_predicted_id.rds)- the atlas for C24 root tip cells (integrated_c24_predicted_id.rds)- the atlas for aba2-3 mutant root tip cells (integrated_aba2_3_predicted_id.rds)&rft.creator=Oliva, Marina &rft.creator=Lister, Ryan &rft.date=2025&rft.type=dataset&rft.language=English Access the data

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Single-cell RNA-seq profiling of >275,000 Arabidopsis thaliana root tip cells across five ecotypes (Col-0, C24, Cvi-0, Ler, and Ws-2), three mutants (aba2-3, pyl11458, and scr-3), and multiple growth conditions, including two water potential stresses (drought). This record contains part (1/2) of the Seurat objects associated with the samples described in the manuscript ‘An environmentally responsive dichotomy in cell lineages of the root’.More precisely, it includes:- the main Col-0 root tip atlas (integrated_col_atlas.rds)- the atlas for Cvi-0 root tip cells (integrated_cvi_predicted_id.rds)- the atlas for C24 root tip cells (integrated_c24_predicted_id.rds)- the atlas for aba2-3 mutant root tip cells (integrated_aba2_3_predicted_id.rds)

Issued: 2025-10-22

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