Software

simpleSA and cede

Commonwealth Scientific and Industrial Research Organisation
Haddon, Malcolm
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/5df2b85801a04&rft.title=simpleSA and cede&rft.identifier=https://doi.org/10.25919/5df2b85801a04&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=simpleSA provides facilitates running fishery assessments for Data-Poor to Data-Moderate fisheries. Includes functions for conducting a modified form of the Catch-MSY analysis, catch-curve analyses, surplus production modelling, age-structured surplus production modelling and age-structured stock reduction analyses. Bootstrap functions are included to allow the characterization of uncertainty in those analyses. The software permits the construction of fisheries management advice as well as providing phase plot diagrams of stock status where both biomass and fishing mortality are estimated.\n\ncede provides facilitates the exploration of variation and patterns within \nfisheries data (Year, Catch, Effort, depth, vessel, etc), especially yearly \npatterns. It also includes functions to produce sketch maps of fisheries \ndata where Lat and Long data, or other spatially explicit data, are \navailable. Finally, there are functions for conducting different types of \nCPUE standardization that are there to act simply as a guide to what is\npossible.\nLineage: two R packages simpleSA and cede were developed as part of FRDC project 2017-102 Reducing the Number of Undefined Species in Future Status of Australian Fish Stocks Reports: Phase Two - training in the assessment of data-poor stocks&rft.creator=Haddon, Malcolm &rft.date=2019&rft.edition=v1&rft_rights=GPLv3 Licence with CSIRO Disclaimer https://research.csiro.au/dap/licences/gplv3-licence-with-csiro-disclaimer/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2019.&rft_subject=Fisheries&rft_subject=Stock assessment&rft_subject=Data poor&rft_subject=Catch MSY&rft_subject=Age structured production model&rft_subject=Fisheries sciences not elsewhere classified&rft_subject=Fisheries sciences&rft_subject=AGRICULTURAL, VETERINARY AND FOOD SCIENCES&rft.type=Computer Program&rft.language=English Access the software

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Gpl

GPLv3 Licence with CSIRO Disclaimer
https://research.csiro.au/dap/licences/gplv3-licence-with-csiro-disclaimer/

Data is accessible online and may be reused in accordance with licence conditions

All Rights (including copyright) CSIRO 2019.

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Brief description

simpleSA provides facilitates running fishery assessments for Data-Poor to Data-Moderate fisheries. Includes functions for conducting a modified form of the Catch-MSY analysis, catch-curve analyses, surplus production modelling, age-structured surplus production modelling and age-structured stock reduction analyses. Bootstrap functions are included to allow the characterization of uncertainty in those analyses. The software permits the construction of fisheries management advice as well as providing phase plot diagrams of stock status where both biomass and fishing mortality are estimated.

cede provides facilitates the exploration of variation and patterns within
fisheries data (Year, Catch, Effort, depth, vessel, etc), especially yearly
patterns. It also includes functions to produce sketch maps of fisheries
data where Lat and Long data, or other spatially explicit data, are
available. Finally, there are functions for conducting different types of
CPUE standardization that are there to act simply as a guide to what is
possible.
Lineage: two R packages simpleSA and cede were developed as part of FRDC project 2017-102 Reducing the Number of Undefined Species in Future Status of Australian Fish Stocks Reports: Phase Two - training in the assessment of data-poor stocks

Available: 2019-12-13

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