Data

Samtools novel phage mapping statistics files

Flinders University
Abbey Hutton (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25451/flinders.30183997.v1&rft.title=Samtools novel phage mapping statistics files&rft.identifier=10.25451/flinders.30183997.v1&rft.publisher=Flinders University&rft.description=Samtools novel phage mapping statistics files Analysis includes the detection of phages across 889 faecal samples under strict and relaxed thresholds. Phage detection was classified using two sets of criteria: strict  ( ≥10 mapped reads, ≥1x mean depth, and ≥70% genome breadth) and Relaxed (≥10 mapped reads and ≥50% breadth) from  (A) genome coverage breath (%), (B) mapped reads (log10 scale), and (C) mean genome coverage depth (log10 scale) &rft.creator=Abbey Hutton&rft.date=2026&rft_rights= https://creativecommons.org/publicdomain/zero/1.0/&rft_subject=Virology&rft_subject=Bacteriology&rft_subject=Bacteriophage&rft_subject=IBD&rft.type=dataset&rft.language=English Access the data

Full description

Samtools novel phage mapping statistics files

Analysis includes the detection of phages across 889 faecal samples under strict and relaxed thresholds. Phage detection was classified using two sets of criteria: strict  ( ≥10 mapped reads, ≥1x mean depth, and ≥70% genome breadth) and Relaxed (≥10 mapped reads and ≥50% breadth) from  (A) genome coverage breath (%), (B) mapped reads (log10 scale), and (C) mean genome coverage depth (log10 scale)

This dataset is part of a larger collection

Click to explore relationships graph
Subjects

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Identifiers