Data

Sampling of planktonic microorganisms for metagenomic, metaproteomic and metatranscriptomic analyses

data.gov.au
Australian Antarctic Division (Owned by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.gov.au/dataset/124d8f7f-c18b-40a8-bbe5-c22ef47ac118&rft.title=Sampling of planktonic microorganisms for metagenomic, metaproteomic and metatranscriptomic analyses&rft.identifier=sampling-of-planktonic-microorganisms-for-metagenomic-metaproteomic-and-metatranscriptomic-anal&rft.publisher=data.gov.au&rft.description=GET DATA - Download point for the data - excel spreadsheetLarge volumes of water (200 - 500 L) were filtered and fractionated by size for various planktonic components: eukaryotic phytoplankton, prokaryotic picoplankton, and marine viruses. Sample sites were chosen to generate the widest diversity, and included planktonic blooms, oligotrophic zones, small polynyas near sea ice, nearshore areas, and Antarctic bottom water from coastal, canyon and deepwater areas. Half of each sample will be used for DNA library construction, and the other half will be used for meta-proteomic analysis. Random shotgun sequencing of the marine genomic libraries should produce a metagenomic snapshot of planktonic life in a variety of marine habitats. \n\nThis work was completed as part of ASAC project 2899 (ASAC_2899).&rft.creator=Australian Antarctic Division&rft.date=2023&rft.coverage=140.0,-67.0 150.0,-67.0 150.0,-46.0 140.0,-46.0 140.0,-67.0&rft.coverage=140.0,-67.0 150.0,-67.0 150.0,-46.0 140.0,-46.0 140.0,-67.0&rft.coverage=true&rft_rights=Other&rft_subject=AMD&rft_subject=AMD/AU&rft_subject=CASO > Climate of Antarctica and the Southern Ocea&rft_subject=CEOS&rft_subject=EARTH SCIENCE > BIOSPHERE > AQUATIC ECOSYSTEMS > P&rft_subject=GEOGRAPHIC REGION > POLAR&rft_subject=IPY > INTERNATIONAL POLAR YEAR&rft_subject=OCEAN > SOUTHERN OCEAN&rft_subject=R/V AA > R/V Aurora Australis&rft_subject=SHIPS&rft_subject=phytoplankton&rft.type=dataset&rft.language=English Access the data
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Large volumes of water (200 - 500 L) were filtered and fractionated by size for various planktonic components: eukaryotic phytoplankton, prokaryotic picoplankton, and marine viruses. Sample sites were chosen to generate the widest diversity, and included planktonic blooms, oligotrophic zones, small polynyas near sea ice, nearshore areas, and Antarctic bottom water from coastal, canyon and deepwater areas. Half of each sample will be used for DNA library construction, and the other half will be used for meta-proteomic analysis. Random shotgun sequencing of the marine genomic libraries should produce a metagenomic snapshot of planktonic life in a variety of marine habitats. \n\nThis work was completed as part of ASAC project 2899 (ASAC_2899).

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140,-67 150,-67 150,-46 140,-46 140,-67

145,-56.5

140,-67 150,-67 150,-46 140,-46 140,-67

145,-56.5

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Subjects
AMD | AMD/AU | CASO > Climate of Antarctica and the Southern Ocea | CEOS | EARTH SCIENCE > BIOSPHERE > AQUATIC ECOSYSTEMS > P | GEOGRAPHIC REGION > POLAR | IPY > INTERNATIONAL POLAR YEAR | OCEAN > SOUTHERN OCEAN | R/V AA > R/V Aurora Australis | SHIPS | phytoplankton |

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