Data

RNA-sequencing of glyphosate-resistant and susceptible Echinochloa colona plants

The University of Western Australia
Yu, Qin ; Pan, Lang ; Han, Heping ; Mao, Lingfeng ; Fan, Longjiang ; Powles, Steve
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://research-repository.uwa.edu.au/en/datasets/7ca5aa9f-022a-4a73-84b7-b0faf6fbf9e2&rft.title=RNA-sequencing of glyphosate-resistant and susceptible Echinochloa colona plants&rft.identifier=7ca5aa9f-022a-4a73-84b7-b0faf6fbf9e2&rft.publisher=National Genomic Data Center (NGDC)&rft.description=This dataset presents RNA-sequencing results of glyphosate-resistant and susceptible Echinochloa colona plants. The transcriptome data was generated in a project identifying candidate genes for non-target-site resistance to glyphosate in a glyphosate-resistant (GR) E. colona population from Western Australia (the Tropical Ord River region) A GR and a susceptible (S) lines were obtained from within the single GR population by vegetative plant cloning plus glyphosate treatment. This dataset included raw RNA-Seq data of 3R and 3S samples (shoot material). RNA samples were sequenced using the Illumina HiSeq 2500 sequencing platform on PE150 reads. &rft.creator=Yu, Qin &rft.creator=Pan, Lang &rft.creator=Han, Heping &rft.creator=Mao, Lingfeng &rft.creator=Fan, Longjiang &rft.creator=Powles, Steve &rft.date=2019&rft.relation=http://research-repository.uwa.edu.au/en/publications/9043f542-b205-4c3d-9e13-d4d9f2311fef&rft.relation=http://research-repository.uwa.edu.au/en/publications/9401663e-769b-4ccc-beb1-0a5a70a8ac8b&rft.relation=http://research-repository.uwa.edu.au/en/publications/c29bf231-d19f-49cc-98f1-1ddec07c49b8&rft.coverage=The GR population was originally collected from the Tropical Ord River region (15°30′S, 128°21′E) of Western Australia&rft_subject=GRDC&rft_subject=Echinochloa colona&rft_subject=glyphosate resistance&rft_subject=RNA-sequencing&rft.type=dataset&rft.language=English Access the data
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This dataset presents RNA-sequencing results of glyphosate-resistant and susceptible Echinochloa colona plants. The transcriptome data was generated in a project identifying candidate genes for non-target-site resistance to glyphosate in a glyphosate-resistant (GR) E. colona population from Western Australia (the Tropical Ord River region) A GR and a susceptible (S) lines were obtained from within the single GR population by vegetative plant cloning plus glyphosate treatment. This dataset included raw RNA-Seq data of 3R and 3S samples (shoot material). RNA samples were sequenced using the Illumina HiSeq 2500 sequencing platform on PE150 reads.

Notes

External Organisations
Hunan Agricultural University; Zhejiang University
Associated Persons
Lang Pan (Contributor); Lingfeng Mao (Creator); Longjiang Fan (Creator)

Created: 2015 to 2015

Issued: 2019

This dataset is part of a larger collection

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Spatial Coverage And Location

text: The GR population was originally collected from the Tropical Ord River region (15°30′S, 128°21′E) of Western Australia

Subjects
Echinochloa colona | GRDC | RNA-sequencing | glyphosate resistance |

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Identifiers
  • global : 7ca5aa9f-022a-4a73-84b7-b0faf6fbf9e2
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