Data

Protist community flowcam data from the K-Axis voyage of the Aurora Australis, January-March, 2016

Australian Antarctic Division
Laurenceau-Cornec, E.C. ; LAURENCEAU-CORNEC, EMMANUEL CHRISTIAN
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26179/5dc9eaf029e0d&rft.title=Protist community flowcam data from the K-Axis voyage of the Aurora Australis, January-March, 2016&rft.identifier=10.26179/5dc9eaf029e0d&rft.publisher=Australian Antarctic Data Centre&rft.description=The data set consists of the FlowCAM vignette images and associated files of particles (e.g. protists, zooplankton, inorganic particles) sampled during the K-AXIS (Kerguelen Axis) cruise (Aurora Australis Voyage 3, 2016) from the CTD rosette and underway seawater line. All images selected as non-identified or unwanted particles have been removed from this clean dataset. Calibration and particle library (identified objects) are also included. The KAXIS_FlowCAM_logsheet.xlsx file describes all sampling information.This dataset includes:- Calibration files: vignettes (.tif), run settings (.txt), raw flowcam files (.edg, .ctx, .lst) and particle properties (.csv)- Data CTD files: e.g. ctd00_D_90_col_clean refers to CTD number 00; D = deep (S = shallow, I = Intermediate); 90 = sample pre-filtration (µm); col = collage (eq. vignette); clean = data were cleaned from unwanted particles (e.g. fibres, dust)- Data underway sampling files: UW03_col_clean refers to underway sample number 3. Contains the same set of files then CTD folders.- Library files: e.g. LIB_CTD90FOC: refers to the vignettes library for the CTD samples imaged with the 90 µm Flow cell (FOC or FC). Contains the collage images (.tif) and the FlowCAM raw files (.edg, .flb)- The logbook KAXIS_FlowCAM_logsheet.xlsx contains all sampling and processing informationProgress Code: completedStatement: The dataset has been quality controlled.&rft.creator=Laurenceau-Cornec, E.C. &rft.creator=LAURENCEAU-CORNEC, EMMANUEL CHRISTIAN &rft.date=2019&rft.coverage=westlimit=60; southlimit=-69; eastlimit=96; northlimit=-57&rft.coverage=westlimit=60; southlimit=-69; eastlimit=96; northlimit=-57&rft.coverage=uplimit=0; downlimit=0&rft.coverage=uplimit=0; downlimit=0&rft.coverage=uplimit=74; downlimit=5&rft.coverage=uplimit=74; downlimit=5&rft_rights=These data are publicly available for download from the provided URL.&rft_rights=Attribution 4.0 International (CC BY 4.0) https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4344_AA_V3_2016_KAXIS_FLOWCAM when using these data.&rft_rights=This metadata record is publicly available.&rft_subject=oceans&rft_subject=biota&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > PROTISTS&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON > ZOOPLANKTON&rft_subject=EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > INORGANIC MATTER&rft_subject=FLOWCAM DATA&rft_subject=K-AXIS&rft_subject=KERGUELEN AXIS&rft_subject=4344&rft_subject=AAS 4344&rft_subject=CTD > Conductivity Temperature Depth&rft_subject=CAMERAS&rft_subject=R/V AA > R/V Aurora Australis&rft_subject=AMD/AU&rft_subject=AMD&rft_subject=CEOS&rft_subject=GEOGRAPHIC REGION > POLAR&rft_subject=OCEAN > SOUTHERN OCEAN&rft_subject=CONTINENT > ANTARCTICA&rft_subject=OCEAN > INDIAN OCEAN > KERGUELEN ISLANDS&rft.type=dataset&rft.language=English Access the data
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CC-BY

Attribution 4.0 International (CC BY 4.0)
https://creativecommons.org/licenses/by/4.0/legalcode

These data are publicly available for download from the provided URL.

This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4344_AA_V3_2016_KAXIS_FLOWCAM when using these data.

This metadata record is publicly available.

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Full description

The data set consists of the FlowCAM vignette images and associated files of particles (e.g. protists, zooplankton, inorganic particles) sampled during the K-AXIS (Kerguelen Axis) cruise (Aurora Australis Voyage 3, 2016) from the CTD rosette and underway seawater line. All images selected as non-identified or unwanted particles have been removed from this clean dataset. Calibration and particle library (identified objects) are also included. The "KAXIS_FlowCAM_logsheet.xlsx" file describes all sampling information.

This dataset includes:
- Calibration files: vignettes (.tif), run settings (.txt), raw flowcam files (.edg, .ctx, .lst) and particle properties (.csv)
- Data CTD files: e.g. "ctd00_D_90_col_clean" refers to CTD number 00; D = deep (S = shallow, I = Intermediate); 90 = sample pre-filtration (µm); col = collage (eq. "vignette); clean = data were cleaned from unwanted particles (e.g. fibres, dust)
- Data underway sampling files: "UW03_col_clean" refers to underway sample number 3. Contains the same set of files then CTD folders.
- Library files: e.g. "LIB_CTD90FOC": refers to the vignettes library for the CTD samples imaged with the 90 µm Flow cell (FOC or FC). Contains the collage images (.tif) and the FlowCAM raw files (.edg, .flb)
- The logbook "KAXIS_FlowCAM_logsheet.xlsx" contains all sampling and processing information

Lineage

Progress Code: completed
Statement: The dataset has been quality controlled.

Notes

Purpose
Describe the spatio-temporal variations of the protist community structure during the K-AXIS voyage.

Data time period: 2016-01-21 to 2016-02-19

This dataset is part of a larger collection

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96,-57 96,-69 60,-69 60,-57 96,-57

78,-63

text: westlimit=60; southlimit=-69; eastlimit=96; northlimit=-57

text: uplimit=0; downlimit=0

text: uplimit=74; downlimit=5

Subjects
4344 | AAS 4344 | AMD | AMD/AU | CAMERAS | CEOS | CONTINENT > ANTARCTICA | CTD > Conductivity Temperature Depth | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > PROTISTS | EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON > ZOOPLANKTON | EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > INORGANIC MATTER | FLOWCAM DATA | GEOGRAPHIC REGION > POLAR | K-AXIS | KERGUELEN AXIS | OCEAN > INDIAN OCEAN > KERGUELEN ISLANDS | OCEAN > SOUTHERN OCEAN | R/V AA > R/V Aurora Australis | biota | oceans |

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Other Information
Download the dataset. (GET DATA > DIRECT DOWNLOAD)

url : https://data.aad.gov.au/eds/4934/download

Public information for AAS project AAS_4344 (PROJECT HOME PAGE)

url : https://projects.aad.gov.au/report_project_public.cfm?project_no=AAS_4344

Citation reference for this metadata record and dataset. (VIEW RELATED INFORMATION)

url : https://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4344_AA_V3_2016_KAXIS_FLOWCAM

Identifiers
ACN 633 798 857