Data

NetFunrankR: An R package for robust functional enrichment test using Network medicine approach and beyond

Charles Sturt University
Azad, Azad
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.24433/co.1414072.v1&rft.title=NetFunrankR: An R package for robust functional enrichment test using Network medicine approach and beyond&rft.identifier=10.24433/co.1414072.v1&rft.publisher=Code Ocean&rft.description=With the given biomarker sets, this package primarily facilitates the following analysis: 1. Topology-aware enrichment: Network-proximity based functional enrichment test utilizing protein-protein interaction network 2. Over-representation enrichment Typical hypergeometric-distribution based over-representation test Results include two spreadsheets, one for ORA-based test, and another for TW-based test. Visualization includes, a venn diagram, double-bar plots and two lollipop plots. This document shows the basic usage of this package.&rft.creator=Azad, Azad &rft.date=2025&rft.type=dataset&rft.language=English Access the data
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With the given biomarker sets, this package primarily facilitates the following analysis: 1. Topology-aware enrichment: Network-proximity based functional enrichment test utilizing protein-protein interaction network 2. Over-representation enrichment Typical hypergeometric-distribution based over-representation test Results include two spreadsheets, one for ORA-based test, and another for TW-based test. Visualization includes, a venn diagram, double-bar plots and two lollipop plots. This document shows the basic usage of this package.

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Azad Azad (Creator)

Created: 2025-05-21 to 2025-05-21

Issued: 2025-05-21

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Identifiers
ACN 633 798 857