Data

Molecular comparison of bacterial diversity in uncontaminated and hydrocarbon contaminated marine sediment

Australian Antarctic Division
Bowman, J. and Powell, S. ; BOWMAN, JOHN ; POWELL, SHANE
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.aad.gov.au/metadata/Nested_DGGE&rft.title=Molecular comparison of bacterial diversity in uncontaminated and hydrocarbon contaminated marine sediment&rft.identifier=http://data.aad.gov.au/metadata/Nested_DGGE&rft.publisher=Australian Antarctic Data Centre&rft.description=Sediment samples which were originally collected as part of ASAC 868 (ASAC_868) are now being investigated using molecular microbial techniques as part of ASAC 1228 (ASAC_1228). Samples were collected in a nested survey design in two hydrocarbon impacted areas and two unimpacted areas. Denaturing gradient gel electrophoresis (DGGE) of a region of the 16S RNA gene was used to investigate the microbial community structure. Banding patterns obtained from the DGGE were transformed into a presence / absence matrix and analysed with a multivariate statistical approach.The download file contains an excel spreadsheet, a csv version of the data, plus a readme file.Progress Code: completed&rft.creator=Bowman, J. and Powell, S. &rft.creator=BOWMAN, JOHN &rft.creator=POWELL, SHANE &rft.date=2002&rft.coverage=westlimit=110.32471; southlimit=-66.51764; eastlimit=110.67627; northlimit=-66.2226&rft.coverage=westlimit=110.32471; southlimit=-66.51764; eastlimit=110.67627; northlimit=-66.2226&rft_rights=These data are publicly available for download at the provided URL.&rft_rights=Attribution 4.0 International (CC BY 4.0) https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=Nested_DGGE when using these data.&rft_rights=This metadata record is publicly available.&rft_subject=biota&rft_subject=environment&rft_subject=oceans&rft_subject=EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > CONTAMINANT LEVELS/SPILLS&rft_subject=EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > OIL SPILLS&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE&rft_subject=BACTERIAL DIVERSITY&rft_subject=BACTERIAL COMMUNITY STRUCTURE&rft_subject=DENATURING GRADIENT GEL ELECTROPHORESIS&rft_subject=HYDROCARBONS&rft_subject=NON-METRIC MULTI DIMENSIONAL SCALING PLOTS&rft_subject=SEDIMENT CORERS&rft_subject=FIELD SURVEYS&rft_subject=AMD/AU&rft_subject=CEOS&rft_subject=AMD&rft_subject=CONTINENT > ANTARCTICA&rft_subject=CONTINENT > ANTARCTICA > Casey&rft_subject=CONTINENT > ANTARCTICA > Brown Bay&rft_subject=CONTINENT > ANTARCTICA > O'Brien Bay&rft_subject=CONTINENT > ANTARCTICA > Sparkes Bay&rft_subject=CONTINENT > ANTARCTICA > Newcomb Bay&rft_subject=GEOGRAPHIC REGION > POLAR&rft.type=dataset&rft.language=English Access the data
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CC-BY

Attribution 4.0 International (CC BY 4.0)
https://creativecommons.org/licenses/by/4.0/legalcode

These data are publicly available for download at the provided URL.

This data set conforms to the CCBY Attribution License
(http://creativecommons.org/licenses/by/4.0/).

Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=Nested_DGGE when using these data.

This metadata record is publicly available.

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Full description

Sediment samples which were originally collected as part of ASAC 868 (ASAC_868) are now being investigated using molecular microbial techniques as part of ASAC 1228 (ASAC_1228). Samples were collected in a nested survey design in two hydrocarbon impacted areas and two unimpacted areas. Denaturing gradient gel electrophoresis (DGGE) of a region of the 16S RNA gene was used to investigate the microbial community structure. Banding patterns obtained from the DGGE were transformed into a presence / absence matrix and analysed with a multivariate statistical approach.

The download file contains an excel spreadsheet, a csv version of the data, plus a readme file.

Lineage

Progress Code: completed

Data time period: 1997-11-01 to 1998-11-30

This dataset is part of a larger collection

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110.67627,-66.2226 110.67627,-66.51764 110.32471,-66.51764 110.32471,-66.2226 110.67627,-66.2226

110.50049,-66.37012

text: westlimit=110.32471; southlimit=-66.51764; eastlimit=110.67627; northlimit=-66.2226

Subjects
AMD | AMD/AU | BACTERIAL COMMUNITY STRUCTURE | BACTERIAL DIVERSITY | CEOS | CONTINENT > ANTARCTICA | CONTINENT > ANTARCTICA > Brown Bay | CONTINENT > ANTARCTICA > Casey | CONTINENT > ANTARCTICA > Newcomb Bay | CONTINENT > ANTARCTICA > O'Brien Bay | CONTINENT > ANTARCTICA > Sparkes Bay | DENATURING GRADIENT GEL ELECTROPHORESIS | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA | EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE | EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > CONTAMINANT LEVELS/SPILLS | EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > OIL SPILLS | FIELD SURVEYS | GEOGRAPHIC REGION > POLAR | HYDROCARBONS | NON-METRIC MULTI DIMENSIONAL SCALING PLOTS | SEDIMENT CORERS | biota | environment | oceans |

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Other Information
Download point for the data. (GET DATA)

uri : https://data.aad.gov.au/eds/2970/download

Public information for ASAC project 1228 (PROJECT HOME PAGE)

uri : https://projects.aad.gov.au/search_projects_results.cfm?project_no=1228

Citation reference for this metadata record and dataset (VIEW RELATED INFORMATION)

uri : http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=Nested_DGGE

Identifiers
  • global : Nested_DGGE