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Metabarcoding in plankton surveys for informing fish spawning areas and monitoring changes in pelagic ecosystems

Commonwealth Scientific and Industrial Research Organisation
Appleyard, Sharon ; Grammer, Gretchen ; Catalano, Sarah ; Bailleul, Fred ; McGrath, Annette ; Ward, Timothy
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/pq4k-k465&rft.title=Metabarcoding in plankton surveys for informing fish spawning areas and monitoring changes in pelagic ecosystems&rft.identifier=https://doi.org/10.25919/pq4k-k465&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=This collection consists of COI metabarcoding raw FASTQ.gz files prepared by CSIRO and SARDI from multiple bulked ichthyoplankton samples (larval fish and fish eggs) that were part of FRDC Project 2019-014 ' Can DNA from routine plankton surveys be used to measure fish spawning areas and monitor changes in pelagic ecosystems.'Lineage: Tagged PCR COI mini-barcode amplicons were prepared from multiple library DNA samples and sequenced on Illumina MiSeq and Next Seq platforms. &rft.creator=Appleyard, Sharon &rft.creator=Grammer, Gretchen &rft.creator=Catalano, Sarah &rft.creator=Bailleul, Fred &rft.creator=McGrath, Annette &rft.creator=Ward, Timothy &rft.date=2025&rft.edition=v5&rft_rights=Creative Commons Attribution-Noncommercial 4.0 Licence https://creativecommons.org/licenses/by-nc/4.0/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO, South Australian Research and Development Institute (SARDI) 2024.&rft_subject=ichthyoplankton&rft_subject=DNA&rft_subject=metabarcoding&rft_subject=COI&rft_subject=Illumina short read sequences&rft_subject=larval fish&rft_subject=fish eggs&rft_subject=Fish physiology and genetics&rft_subject=Fisheries sciences&rft_subject=AGRICULTURAL, VETERINARY AND FOOD SCIENCES&rft.type=dataset&rft.language=English Access the data
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Creative Commons Attribution-Noncommercial 4.0 Licence
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Data is accessible online and may be reused in accordance with licence conditions

All Rights (including copyright) CSIRO, South Australian Research and Development Institute (SARDI) 2024.

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This collection consists of COI metabarcoding raw FASTQ.gz files prepared by CSIRO and SARDI from multiple bulked ichthyoplankton samples (larval fish and fish eggs) that were part of FRDC Project 2019-014 ' Can DNA from routine plankton surveys be used to measure fish spawning areas and monitor changes in pelagic ecosystems.'
Lineage: Tagged PCR COI mini-barcode amplicons were prepared from multiple library DNA samples and sequenced on Illumina MiSeq and Next Seq platforms.

Available: 2025-11-10

Data time period: 2021-01-18 to 2024-12-01

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Subjects
Agricultural, Veterinary and Food Sciences | COI | DNA | Fish Physiology and Genetics | Fisheries Sciences | Illumina short read sequences | fish eggs | ichthyoplankton | larval fish | metabarcoding |

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Identifiers
ACN 633 798 857