Data

Krill microbiome

Australian Ocean Data Network
Deagle, B.E., King, R., Clarke, L. ; DEAGLE, BRUCE E. ; KING, ROB ; CLARKE, LAURENCE
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.aad.gov.au/metadata/records/AAS_4313_KRILL_MICROBIOME&rft.title=Krill microbiome&rft.identifier=http://data.aad.gov.au/metadata/records/AAS_4313_KRILL_MICROBIOME&rft.publisher=Australian Antarctic Data Centre&rft.description=Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene. The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi: 10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/fullProgress Code: completedStatement: Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail.&rft.creator=Deagle, B.E., King, R., Clarke, L. &rft.creator=DEAGLE, BRUCE E. &rft.creator=KING, ROB &rft.creator=CLARKE, LAURENCE &rft.date=2019&rft.coverage=westlimit=63.72588333; southlimit=-66.81288333; eastlimit=89.12368333; northlimit=-60.18&rft.coverage=westlimit=63.72588333; southlimit=-66.81288333; eastlimit=89.12368333; northlimit=-60.18&rft.coverage=uplimit=80; downlimit=0&rft.coverage=uplimit=80; downlimit=0&rft_rights=These data are publicly available for download from the provided URL.&rft_rights=Attribution 4.0 International (CC BY 4.0) https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4313_KRILL_MICROBIOME when using these data.&rft_rights=This metadata record is publicly available.&rft_subject=biota&rft_subject=oceans&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL)&rft_subject=EUPHAUSIA SUPERBA&rft_subject=MICROBIOME&rft_subject=16S RRNA&rft_subject=ILLUMINA MISEQ&rft_subject=ADS > Automated DNA Sequencer&rft_subject=R/V AA > R/V Aurora Australis&rft_subject=AMD/AU&rft_subject=AMD&rft_subject=CEOS&rft_subject=GEOGRAPHIC REGION > POLAR&rft_subject=OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS&rft.type=dataset&rft.language=English Access the data
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Licence & Rights:

Open Licence view details
CC-BY

Attribution 4.0 International (CC BY 4.0)
https://creativecommons.org/licenses/by/4.0/legalcode

These data are publicly available for download from the provided URL.

This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/).

Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4313_KRILL_MICROBIOME when using these data.

This metadata record is publicly available.

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Brief description

Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene. The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi: 10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/full

Lineage

Progress Code: completed
Statement: Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail.

Notes

Purpose
To characterise the bacterial communities in different krill tissues, and compare them with those in the surrounding seawater.

Data time period: 2016-01-31 to 2016-02-19

This dataset is part of a larger collection

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89.12368,-60.18 89.12368,-66.81288 63.72588,-66.81288 63.72588,-60.18 89.12368,-60.18

76.42478333,-63.496441665

text: westlimit=63.72588333; southlimit=-66.81288333; eastlimit=89.12368333; northlimit=-60.18

text: uplimit=80; downlimit=0

Subjects
16S RRNA | ADS > Automated DNA Sequencer | AMD | AMD/AU | CEOS | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL) | EUPHAUSIA SUPERBA | GEOGRAPHIC REGION > POLAR | ILLUMINA MISEQ | MICROBIOME | OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS | R/V AA > R/V Aurora Australis | biota | oceans |

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Other Information
Download the dataset (GET DATA)

uri : https://data.aad.gov.au/eds/4867/download

Identifiers
  • global : AAS_4313_KRILL_MICROBIOME