Data

Impact of varying light and dew on ground cover estimates from active NDVI, RGB and LiDAR

Commonwealth Scientific and Industrial Research Organisation
Deery, David ; Smith, David J ; Davy, Robert ; Rebetzke, Greg ; James, Richard ; Jimenez-Berni, Jose
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/0xke-d287&rft.title=Impact of varying light and dew on ground cover estimates from active NDVI, RGB and LiDAR&rft.identifier=https://doi.org/10.25919/0xke-d287&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Data supporting the research paper published in Plant Phenomics Journal: https://doi.org/10.34133/2021/9842178\n\nD. M. Deery, D. J. Smith, R. Davy, J. A. Jimenez-Berni, G. J. Rebetzke, and R. A. James,\n“Impact of varying light and dew on ground cover estimates from active ndvi, rgb, and lidar,” Plant Phenomics, vol. 2021, pp. 1–14, May 2021. doi: 10.34133/2021/9842178.\n\nA field experiment was conducted in 2017 at the Managed Environment Facility (MEF), Yanco Agricultural Institute, Australia, on chromosol soil with a clay-loam texture. The experiment was sown on May 29th after a pea crop, managed with appropriate nutrition, and pest/disease control measures. It involved 192 plots (6 m long, 7 rows, 25 cm spacing, 200 seeds/m²) of 99 wheat genotypes varying in canopy traits. Genotypes were sown in a partial-replicate design with an average replication of 1.9.\n\nMeteorological data were sourced from a nearby weather station, while solar radiation was measured 60 km away in Griffith, NSW. Phenotypic data were collected using Phenomobile Lite™, a portable terrestrial phenotyping platform equipped with LiDAR, an NDVI GreenSeeker® sensor, and a digital camera. Data were geocoded and collected during two events (August 1-2 and August 17-18, 2017), capturing hourly measurements from 12:00 to 18:00 and 07:00 to 12:00 across both days.\n\nThe collected data included LiDAR-derived canopy coverage (green cover, GC), NDVI values, and RGB images. LiDAR data were processed using a custom pipeline, geocoded, segmented into plots, and analyzed to extract GC. RGB images were analyzed for green pixel content, and NDVI data were averaged across plots.\nLineage: Refer to materials and methods section of published research paper: https://doi.org/10.34133/2021/9842178&rft.creator=Deery, David &rft.creator=Smith, David J &rft.creator=Davy, Robert &rft.creator=Rebetzke, Greg &rft.creator=James, Richard &rft.creator=Jimenez-Berni, Jose &rft.date=2024&rft.edition=v4&rft.relation=https://doi.org/10.34133/2021/9842178&rft.coverage=146.42919999999998,-34.630900000000004&rft_rights=Creative Commons Attribution 4.0 International Licence https://creativecommons.org/licenses/by/4.0/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2021.&rft_subject=plant canopy coverage ratio&rft_subject=vegetation fractional coverage&rft_subject=green fraction&rft_subject=Agricultural systems analysis and modelling&rft_subject=Agriculture, land and farm management&rft_subject=AGRICULTURAL, VETERINARY AND FOOD SCIENCES&rft_subject=Agronomy&rft_subject=Crop and pasture production&rft_subject=Crop and pasture biochemistry and physiology&rft.type=dataset&rft.language=English Access the data

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Data supporting the research paper published in Plant Phenomics Journal: https://doi.org/10.34133/2021/9842178

D. M. Deery, D. J. Smith, R. Davy, J. A. Jimenez-Berni, G. J. Rebetzke, and R. A. James,
“Impact of varying light and dew on ground cover estimates from active ndvi, rgb, and lidar,” Plant Phenomics, vol. 2021, pp. 1–14, May 2021. doi: 10.34133/2021/9842178.

A field experiment was conducted in 2017 at the Managed Environment Facility (MEF), Yanco Agricultural Institute, Australia, on chromosol soil with a clay-loam texture. The experiment was sown on May 29th after a pea crop, managed with appropriate nutrition, and pest/disease control measures. It involved 192 plots (6 m long, 7 rows, 25 cm spacing, 200 seeds/m²) of 99 wheat genotypes varying in canopy traits. Genotypes were sown in a partial-replicate design with an average replication of 1.9.

Meteorological data were sourced from a nearby weather station, while solar radiation was measured 60 km away in Griffith, NSW. Phenotypic data were collected using Phenomobile Lite™, a portable terrestrial phenotyping platform equipped with LiDAR, an NDVI GreenSeeker® sensor, and a digital camera. Data were geocoded and collected during two events (August 1-2 and August 17-18, 2017), capturing hourly measurements from 12:00 to 18:00 and 07:00 to 12:00 across both days.

The collected data included LiDAR-derived canopy coverage (green cover, GC), NDVI values, and RGB images. LiDAR data were processed using a custom pipeline, geocoded, segmented into plots, and analyzed to extract GC. RGB images were analyzed for green pixel content, and NDVI data were averaged across plots.
Lineage: Refer to materials and methods section of published research paper: https://doi.org/10.34133/2021/9842178

Available: 2024-10-22

Data time period: 2017-08-01 to 2017-08-18

This dataset is part of a larger collection

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146.4292,-34.6309

146.4292,-34.6309