Data

IMOS - Satellite Remote Sensing - Ocean Colour - Bio Optical Database of Australian Waters

Integrated Marine Observing System
Integrated Marine Observing System (IMOS)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
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This Satellite Remote Sensing dataset covers the southern oceans worldwide and Indonesian waters. The Australian Antarctic Division (AAD) and the Australian Institute of Marine Science (AIMS) are providing some of the data to the bio-optical database. This activity aims to collate measurements undertaken prior to the commencement of IMOS by several members of the Australian biological oceanography community. This database is used to assess accuracy of Satellite ocean colour products for current and forthcoming satellite missions for the Australian Waters. The bio-optical database underpins the assessment of ocean colour products in the Australian region (e.g. chlorophyll a concentrations, phytoplankton species composition and primary production). Such a data set is crucial to quantify the uncertainty in the ocean colour products in our region. Further, it is essential to assessing new ocean colour data products generated for the Australian region. The contribution of such a database to international space agencies ensures that the accuracy of global algorithm developed for future sensors will increase for Australian waters as bias towards Northern Hemisphere observation will be reduced. 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84,-57 84,-54 87,-54 87,-63 90,-63 90,-60.00000000000001 96,-60.00000000000001 96,-57 99,-57 99,-54 101.99999999999999,-54 101.99999999999999,-57 108,-57 108,-54 116.99999999999999,-54 116.99999999999999,-57 114,-57 114,-66 99,-66 99,-63 96,-63 96,-66 80.99999999999999,-66 80.99999999999999,-69 75,-69 75,-72 72,-72&rft.coverage=80.99999999999999,-60.00000000000001 80.99999999999999,-63 84,-63 84,-60.00000000000001 80.99999999999999,-60.00000000000001&rft.coverage=108,-57 108,-60.00000000000001 105,-60.00000000000001 105,-63 110.99999999999999,-63 110.99999999999999,-57 108,-57&rft_rights=Creative Commons Attribution 4.0 International License http://creativecommons.org/licenses/by/4.0/&rft_rights=The citation in a list of references is: IMOS [year-of-data-download], [Title], [data-access-URL], accessed [date-of-access].&rft_rights=Any users of IMOS data are required to clearly acknowledge the source of the material derived from IMOS in the format: Data was sourced from Australia?s Integrated Marine Observing System (IMOS) ? IMOS is enabled by the National Collaborative Research Infrastructure strategy (NCRIS). If relevant, also credit other organisations involved in collection of this particular datastream (as listed in 'credit' in the metadata record).&rft_rights=Data, products and services from IMOS are provided as is without any warranty as to fitness for a particular purpose.&rft_subject=oceans&rft_subject=CONDUCTIVITY&rft_subject=EARTH SCIENCE&rft_subject=OCEANS&rft_subject=SALINITY/DENSITY&rft_subject=WATER TEMPERATURE&rft_subject=OCEAN TEMPERATURE&rft_subject=WATER DEPTH&rft_subject=BATHYMETRY/SEAFLOOR TOPOGRAPHY&rft_subject=FLUORESCENCE&rft_subject=OCEAN OPTICS&rft_subject=OXYGEN&rft_subject=OCEAN CHEMISTRY&rft_subject=PHOTOSYNTHETICALLY ACTIVE RADIATION&rft_subject=TURBIDITY&rft_subject=OCEAN CURRENTS&rft_subject=OCEAN CIRCULATION&rft_subject=NUTRIENTS&rft_subject=PLANKTON&rft_subject=BIOSPHERE&rft_subject=AQUATIC ECOSYSTEMS&rft_subject=CARBON DIOXIDE&rft_subject=INORGANIC CARBON&rft_subject=ALKALINITY&rft_subject=Global / Oceans | Southern Ocean&rft_subject=Marine Features (Australia) | Great Australian Bight, SA/WA&rft_subject=Regional Seas | Banda Sea&rft_subject=Regional Seas | Tasman Sea&rft_subject=Regional Seas | Arafura Sea&rft_subject=Regional Seas | Solomon Sea&rft_subject=Global / Oceans | Atlantic Ocean&rft_subject=Regional Seas | Java Sea&rft_subject=Marine Features (Australia) | Bass Strait, TAS/VIC&rft_subject=Global / Oceans | Pacific Ocean&rft_subject=Regional Seas | Timor Sea&rft_subject=Regional Seas | Coral Sea&rft_subject=Global / Oceans | Indian Ocean&rft_subject=Countries | Madagascar&rft_subject=Countries | Papua New Guinea&rft_subject=Countries | Australia&rft_subject=States, Territories (Australia) | Queensland&rft_subject=Countries | South Africa&rft_subject=States, Territories (Australia) | Tasmania&rft_subject=Countries | Chile&rft_subject=States, Territories (Australia) | Northern Territory&rft_subject=States, Territories (Australia) | South Australia&rft_subject=Countries | Brazil&rft_subject=Offshore Islands (Australia) | Macquarie Island&rft_subject=States, Territories (Australia) | Western Australia&rft_subject=States, Territories (Australia) | Victoria&rft_subject=Countries | Singapore&rft_subject=Continents | Antarctica&rft_subject=Countries | Indonesia&rft_subject=Countries | Timor-Leste&rft_subject=States, Territories (Australia) | New South Wales&rft_subject=small boat&rft_subject=vessel of opportunity&rft_subject=research vessel&rft_subject=coastal structure&rft_subject=Concentration of suspended particulate material (organic) per unit volume of the water body&rft_subject=Concentration of chlorophyll-c1c2 per unit volume of the water body&rft_subject=Concentration of chlorophyll-b plus divinyl chlorophyll-b per unit volume of the water body&rft_subject=Concentration of chlorophyll-a per unit volume of the water body&rft_subject=Concentration of total chlorophyll-a plus chlorophyll-b plus chlorophyll-c per unit volume of the water body&rft_subject=Concentration of astaxanthin per unit volume of the water body&rft_subject=Concentration of chlorophyll-a plus divinyl chlorophyll-a per unit volume of the water body&rft_subject=Concentration of photosynthetic pigments per unit volume of the water body&rft_subject=Light absorption coefficient of nonalgal particles&rft_subject=Concentration of diadinoxanthin per unit volume of the water body&rft_subject=Concentration of 19-hexanoyloxyfucoxanthin per unit volume of the water body&rft_subject=Concentration of Mg-2,4-divinyl pheoporphyrin a5 monomethyl ester per unit volume of the water body&rft_subject=Concentration of diatoxanthin per unit volume of the water body&rft_subject=Concentration of chlorophyll-c2 per unit volume of the water body&rft_subject=Concentration of pyropheophytin-a per unit volume of the water body&rft_subject=Concentration of divinyl chlorophyll-a per unit volume of the water body&rft_subject=Light absorption coefficient of phytoplankton&rft_subject=Concentration of gyroxanthin diester per unit volume of the water body&rft_subject=Concentration of chlorophyll-c3 per unit volume of the water body&rft_subject=Concentration of photosynthetic carotenoids per unit volume of the water body&rft_subject=Total absorption coefficient in the water body&rft_subject=Concentration of peridinin per unit volume of the water body&rft_subject=Concentration of lutein per unit volume of the water body&rft_subject=Total backscattering coefficient in the water body&rft_subject=Concentration of photoprotective carotenoids per unit volume of the water body&rft_subject=Concentration of fucoxanthin per unit volume of the water body&rft_subject=Concentration of pheophytin-a per unit volume of the water body&rft_subject=Concentration of diadinochrome per unit volume of the water body&rft_subject=Concentration of alpha-carotene per unit volume of the water body&rft_subject=Concentration of 4-keto-19-hexanoyloxyfucoxanthin per unit volume of the water body&rft_subject=Concentration of pyropheophorbide-a per unit volume of the water body&rft_subject=Concentration of chlorophyll-c1 per unit volume of the water body&rft_subject=Concentration of canthaxanthin per unit volume of the water body&rft_subject=Concentration of divinyl chlorophyll-b per unit volume of the water body&rft_subject=Concentration of neoxanthin per unit volume of the water body&rft_subject=Concentration of chlorophyll-b per unit volume of the water body&rft_subject=Concentration of beta-carotene per unit volume of the water body&rft_subject=Concentration of alpha-carotene and beta-carotene per unit volume of the water body&rft_subject=Light absorption coefficient of dissolved organic matter&rft_subject=Concentration of total chlorophyll-c per unit volume of the water body&rft_subject=Concentration of total diagnostic pigments per unit volume of the water body&rft_subject=Concentration of suspended particulate material per unit volume of the water body&rft_subject=Concentration of total accessory pigments per unit volume of the water body&rft_subject=Concentration of pheophorbide-a per unit volume of the water body&rft_subject=Total attenuation coefficient in the water body&rft_subject=Concentration of lycopene per unit volume of the water body&rft_subject=Concentration of suspended particulate material (inorganic) per unit volume of the water body&rft_subject=Concentration of violaxanthin per unit volume of the water body&rft_subject=Concentration of pheophytin-b per unit volume of the water body&rft_subject=Concentration of zeaxanthin per unit volume of the water body&rft_subject=Concentration of total chlorophyll-a per unit volume of the water body&rft_subject=Concentration of alloxanthin per unit volume of the water body&rft_subject=Concentration of total pigment per unit volume of the water body&rft_subject=Concentration of prasinoxanthin per unit volume of the water body&rft_subject=Concentration of chlorophyllide-a per unit volume of the water body&rft_subject=Concentration of dinoxanthin per unit volume of the water body&rft_subject=Concentration of antheraxanthin per unit volume of the water body&rft_subject=Concentration of echinenone per unit mass of the water body&rft_subject=Concentration of 19-butanoyloxyfucoxanthin per unit volume of the water body&rft_subject=Ocean Colour Sub-Facility, Integrated Marine Observing System (IMOS)&rft_subject=Ocean Gliders Facility, Integrated Marine Observing System (IMOS)&rft_subject=National Mooring Network Facility, Integrated Marine Observing System (IMOS)&rft_subject=National Reference Stations Sub-Facility, Integrated Marine Observing System (IMOS)&rft.type=dataset&rft.language=English Access the data
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Licence & Rights:

Open Licence view details
CC-BY

Creative Commons Attribution 4.0 International License
http://creativecommons.org/licenses/by/4.0/

The citation in a list of references is: "IMOS [year-of-data-download], [Title], [data-access-URL], accessed [date-of-access]."

Any users of IMOS data are required to clearly acknowledge the source of the material derived from IMOS in the format: "Data was sourced from Australia?s Integrated Marine Observing System (IMOS) ? IMOS is enabled by the National Collaborative Research Infrastructure strategy (NCRIS)." If relevant, also credit other organisations involved in collection of this particular datastream (as listed in 'credit' in the metadata record).

Data, products and services from IMOS are provided "as is" without any warranty as to fitness for a particular purpose.

Access:

Open

Full description

Establishment of a bio-optical database of Australian Waters by harvesting all bio-geochemical and bio-optical data from all the IMOS data streams (National Mooring Network, National Reference Stations, Ocean Gliders, Satellite Remote Sensing Ocean Colour - Lucinda Jetty) and from legacy databases (e.g SRFME/WAMSI, Great Barrier Reef Long Term Monitoring Program, Aquafin CRC, Port Hacking transect, Research cruises in the Southern Ocean) it is possible to establish an Australian Database of bio-geochemical and bio-optical data. This Satellite Remote Sensing dataset covers the southern oceans worldwide and Indonesian waters. The Australian Antarctic Division (AAD) and the Australian Institute of Marine Science (AIMS) are providing some of the data to the bio-optical database. This activity aims to collate measurements undertaken prior to the commencement of IMOS by several members of the Australian biological oceanography community. This database is used to assess accuracy of Satellite ocean colour products for current and forthcoming satellite missions for the Australian Waters. The bio-optical database underpins the assessment of ocean colour products in the Australian region (e.g. chlorophyll a concentrations, phytoplankton species composition and primary production). Such a data set is crucial to quantify the uncertainty in the ocean colour products in our region. Further, it is essential to assessing new ocean colour data products generated for the Australian region. The contribution of such a database to international space agencies ensures that the accuracy of global algorithm developed for future sensors will increase for Australian waters as bias towards Northern Hemisphere observation will be reduced. The database contains biooptical data (i.e. HPLC, Chlorophyll by spectrophotometric methods, full spectral absorptions, TSS ) and in situ optical data (Vertical attenuation, water leaving radiance, reflectances, Atmospheric Optical Depth, spectral and single channel absorption and backscattering).

Lineage

Maintenance and Update Frequency: continual

Notes

Credit
Australia's Integrated Marine Observing System (IMOS) is enabled by the National Collaborative Research Infrastructure Strategy (NCRIS). It is operated by a consortium of institutions as an unincorporated joint venture, with the University of Tasmania as Lead Agent.
Credit
Australian Antarctic Division (AAD)
Credit
Australian Institute of Marine Science (AIMS)
Credit
CSIRO Oceans & Atmosphere
Credit
Marine National Facility (MNF)

Created: 14 06 2011

Data time period: 07 12 1997

This dataset is part of a larger collection

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150,-3 150,-6 141,-6 141,3 153,3 153,-3 150,-3

147,-1.5

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108,-60

Subjects
Alkalinity | AQUATIC ECOSYSTEMS | BATHYMETRY/SEAFLOOR TOPOGRAPHY | BIOSPHERE | Carbon Dioxide | Conductivity | Concentration of 19-butanoyloxyfucoxanthin per unit volume of the water body | Concentration of 19-hexanoyloxyfucoxanthin per unit volume of the water body | Concentration of 4-keto-19-hexanoyloxyfucoxanthin per unit volume of the water body | Concentration of Mg-2,4-divinyl pheoporphyrin a5 monomethyl ester per unit volume of the water body | Concentration of alloxanthin per unit volume of the water body | Concentration of alpha-carotene and beta-carotene per unit volume of the water body | Concentration of alpha-carotene per unit volume of the water body | Concentration of antheraxanthin per unit volume of the water body | Concentration of astaxanthin per unit volume of the water body | Concentration of beta-carotene per unit volume of the water body | Concentration of canthaxanthin per unit volume of the water body | Concentration of chlorophyll-a per unit volume of the water body | Concentration of chlorophyll-a plus divinyl chlorophyll-a per unit volume of the water body | Concentration of chlorophyll-b per unit volume of the water body | Concentration of chlorophyll-b plus divinyl chlorophyll-b per unit volume of the water body | Concentration of chlorophyll-c1 per unit volume of the water body | Concentration of chlorophyll-c1c2 per unit volume of the water body | Concentration of chlorophyll-c2 per unit volume of the water body | Concentration of chlorophyll-c3 per unit volume of the water body | Concentration of chlorophyllide-a per unit volume of the water body | Concentration of diadinochrome per unit volume of the water body | Concentration of diadinoxanthin per unit volume of the water body | Concentration of diatoxanthin per unit volume of the water body | Concentration of dinoxanthin per unit volume of the water body | Concentration of divinyl chlorophyll-a per unit volume of the water body | Concentration of divinyl chlorophyll-b per unit volume of the water body | Concentration of echinenone per unit mass of the water body | Concentration of fucoxanthin per unit volume of the water body | Concentration of gyroxanthin diester per unit volume of the water body | Concentration of lutein per unit volume of the water body | Concentration of lycopene per unit volume of the water body | Concentration of neoxanthin per unit volume of the water body | Concentration of peridinin per unit volume of the water body | Concentration of pheophorbide-a per unit volume of the water body | Concentration of pheophytin-a per unit volume of the water body | Concentration of pheophytin-b per unit volume of the water body | Concentration of photoprotective carotenoids per unit volume of the water body | Concentration of photosynthetic carotenoids per unit volume of the water body | Concentration of photosynthetic pigments per unit volume of the water body | Concentration of prasinoxanthin per unit volume of the water body | Concentration of pyropheophorbide-a per unit volume of the water body | Concentration of pyropheophytin-a per unit volume of the water body | Concentration of suspended particulate material (inorganic) per unit volume of the water body | Concentration of suspended particulate material (organic) per unit volume of the water body | Concentration of suspended particulate material per unit volume of the water body | Concentration of total accessory pigments per unit volume of the water body | Concentration of total chlorophyll-a per unit volume of the water body | Concentration of total chlorophyll-a plus chlorophyll-b plus chlorophyll-c per unit volume of the water body | Concentration of total chlorophyll-c per unit volume of the water body | Concentration of total diagnostic pigments per unit volume of the water body | Concentration of total pigment per unit volume of the water body | Concentration of violaxanthin per unit volume of the water body | Concentration of zeaxanthin per unit volume of the water body | Continents | Antarctica | Countries | Australia | Countries | Brazil | Countries | Chile | Countries | Indonesia | Countries | Madagascar | Countries | Papua New Guinea | Countries | Singapore | Countries | South Africa | Countries | Timor-Leste | EARTH SCIENCE | Fluorescence | Global / Oceans | Atlantic Ocean | Global / Oceans | Indian Ocean | Global / Oceans | Pacific Ocean | Global / Oceans | Southern Ocean | Inorganic Carbon | Light absorption coefficient of dissolved organic matter | Light absorption coefficient of nonalgal particles | Light absorption coefficient of phytoplankton | Marine Features (Australia) | Bass Strait, TAS/VIC | Marine Features (Australia) | Great Australian Bight, SA/WA | Nutrients | National Mooring Network Facility, Integrated Marine Observing System (IMOS) | National Reference Stations Sub-Facility, Integrated Marine Observing System (IMOS) | OCEAN CHEMISTRY | OCEAN CIRCULATION | Ocean Currents | OCEAN OPTICS | OCEAN TEMPERATURE | OCEANS | Oxygen | Ocean Colour Sub-Facility, Integrated Marine Observing System (IMOS) | Ocean Gliders Facility, Integrated Marine Observing System (IMOS) | Offshore Islands (Australia) | Macquarie Island | Photosynthetically Active Radiation | Plankton | Regional Seas | Arafura Sea | Regional Seas | Banda Sea | Regional Seas | Coral Sea | Regional Seas | Java Sea | Regional Seas | Solomon Sea | Regional Seas | Tasman Sea | Regional Seas | Timor Sea | SALINITY/DENSITY | States, Territories (Australia) | New South Wales | States, Territories (Australia) | Northern Territory | States, Territories (Australia) | Queensland | States, Territories (Australia) | South Australia | States, Territories (Australia) | Tasmania | States, Territories (Australia) | Victoria | States, Territories (Australia) | Western Australia | Turbidity | Total absorption coefficient in the water body | Total attenuation coefficient in the water body | Total backscattering coefficient in the water body | Water Depth | Water Temperature | coastal structure | oceans | research vessel | small boat | vessel of opportunity |

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Other Information
(Satellite Remote Sensing page on IMOS website)

uri : http://imos.org.au/srs.html

(NetCDF files via THREDDS catalog)

uri : http://thredds.aodn.org.au/thredds/catalog/IMOS/SRS/OC/BODBAW/catalog.html

(Files via Amazon Web Services S3 storage)

uri : http://data.aodn.org.au/?prefix=IMOS/SRS/OC/BODBAW/

(View and download data though the AODN Portal)

uri : https://portal.aodn.org.au/search?uuid=97b9fe73-ee44-437f-b2ae-5b8613f81042

Bio Optical DataBase (imos:srs_oc_bodbaw_trajectory_profile_map)

uri : http://geoserver-123.aodn.org.au/geoserver/wms

The ncUrlList is a WFS service that returns a list of URLs matching a query. (srs_oc_bodbaw_trajectory_profile_map#url_nc)

uri : http://geoserver-123.aodn.org.au/geoserver/ows

This is a WFS service that returns a list of un-subsetted CSV files matching a query. (Un-subsetted CSVs)

uri : http://geoserver-123.aodn.org.au/geoserver/ows?service=WFS&request=GetFeature&typeName=srs_oc_bodbaw_trajectory_profile_map&propertyName=url_csv&outputFormat=csv

(ncUrlList help documentation)

uri : https://help.aodn.org.au/web-services/ncurllist-service/

global : 744ac2a9-689c-40d3-b262-0df6863f0327

Identifiers
  • global : 97b9fe73-ee44-437f-b2ae-5b8613f81042