Data

Genetic and genomic data for Australian hammerhead species

Commonwealth Scientific and Industrial Research Organisation
Appleyard, Sharon ; National Environmental Science Programme (NESP) ; Australian Institute of Marine Sciences
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/5dfcd41e0771e&rft.title=Genetic and genomic data for Australian hammerhead species&rft.identifier=https://doi.org/10.25919/5dfcd41e0771e&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Input files of mtDNA Control Region and NADH2 haplotype frequencies and Arlequin microsatellite genotypes of great hammerheads (Sphyrna mokarran) and winghead sharks (Eusphyra blochii). FASTQ files from microsatellite library and resultant primers for great hammerheads. Demultiplexed FASTQ files from GBS analysis at AGRF for S. mokarran and E. blochii from Australia. Raw and filtered Variant Call files from GBS pipeline of great hammerheads and winghead sharks. Metadata location files for both species.Lineage: As part of a National Research Collections Australia, Oceans & Atmosphere and NESP research project (on spatial analysis and biodiversity assessments of Australian hammerhead species) mtDNA, microsatellite analyses were undertaken at CSIRO marine laboratories, GBS and SNP (via Stacks) analyses were undertaken at the AGRF.&rft.creator=Appleyard, Sharon &rft.creator=National Environmental Science Programme (NESP) &rft.creator=Australian Institute of Marine Sciences &rft.date=2019&rft.edition=v1&rft_rights=CSIRO Data Licence https://research.csiro.au/dap/licences/csiro-data-licence/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2019.&rft_subject=great hammerheads&rft_subject=winghead sharks&rft_subject=mitochondrial DNA&rft_subject=microsatellite loci&rft_subject=genotype by sequencing&rft_subject=single nucleotide polymorphisms&rft_subject=Genetics not elsewhere classified&rft_subject=Genetics&rft_subject=BIOLOGICAL SCIENCES&rft.type=dataset&rft.language=English Access the data
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Input files of mtDNA Control Region and NADH2 haplotype frequencies and Arlequin microsatellite genotypes of great hammerheads (Sphyrna mokarran) and winghead sharks (Eusphyra blochii). FASTQ files from microsatellite library and resultant primers for great hammerheads. Demultiplexed FASTQ files from GBS analysis at AGRF for S. mokarran and E. blochii from Australia. Raw and filtered Variant Call files from GBS pipeline of great hammerheads and winghead sharks. Metadata location files for both species.
Lineage: As part of a National Research Collections Australia, Oceans & Atmosphere and NESP research project (on spatial analysis and biodiversity assessments of Australian hammerhead species) mtDNA, microsatellite analyses were undertaken at CSIRO marine laboratories, GBS and SNP (via Stacks) analyses were undertaken at the AGRF.

Available: 2019-12-05

Data time period: 2003-01-01 to 2017-01-01

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Subjects
Biological Sciences | Genetics | Genetics Not Elsewhere Classified | genotype by sequencing | great hammerheads | microsatellite loci | mitochondrial DNA | single nucleotide polymorphisms | winghead sharks |

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Identifiers
ACN 633 798 857