Data

Fungal genomics - Cairneyella variabilis

Commonwealth Scientific and Industrial Research Organisation
Tran-Dinh, Nai
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/08/541A80B32119D&rft.title=Fungal genomics - Cairneyella variabilis&rft.identifier=https://doi.org/10.4225/08/541A80B32119D&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Genomic information for Cairneyella variabilis including:\n\n- All protein calls from AUGUSTUS 2.6.1 (generated 24-10-2013)\n- cdsexons calls from AUGUSTUS 2.6.1 (generated 24-10-2013)\n- coding sequence calls for proteins from AUGUSTUS 2.6.1 (generated 24-10-2013)\n- all contigs less than 1000 bp from Velvet\n- all proteins with signal peptides from SignalP\n- mitochondrial genome\n\nLineage: Fungal isolation\nDNA extraction\nLibrary preparation\nIllumina (both HiSeq and MiSeq)\nBioinformatics&rft.creator=Tran-Dinh, Nai &rft.date=2014&rft.edition=v4&rft.coverage=150.48,-33.75&rft_rights=CSIRO Data Licence https://research.csiro.au/dap/licences/csiro-data-licence/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO Australia 2013.&rft_subject=Fungi&rft_subject=genomics&rft_subject=bioinformatics&rft_subject=mycorrhiza&rft_subject=ericoid&rft_subject=Bioinformatics and computational biology not elsewhere classified&rft_subject=Bioinformatics and computational biology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Phylogeny and comparative analysis&rft_subject=Evolutionary biology&rft_subject=Genomics&rft_subject=Genetics&rft_subject=Microbial ecology&rft_subject=Microbiology&rft_subject=Mycology&rft.type=dataset&rft.language=English Access the data
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Data is accessible online and may be reused in accordance with licence conditions

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Brief description

Genomic information for Cairneyella variabilis including:

- All protein calls from AUGUSTUS 2.6.1 (generated 24-10-2013)
- cdsexons calls from AUGUSTUS 2.6.1 (generated 24-10-2013)
- coding sequence calls for proteins from AUGUSTUS 2.6.1 (generated 24-10-2013)
- all contigs less than 1000 bp from Velvet
- all proteins with signal peptides from SignalP
- mitochondrial genome

Lineage: Fungal isolation
DNA extraction
Library preparation
Illumina (both HiSeq and MiSeq)
Bioinformatics

Available: 2014-09-18

Data time period: 2013-01-01 to ..

150.48,-33.75

150.48,-33.75

Subjects
Biological Sciences | Bioinformatics and Computational Biology | Bioinformatics and Computational Biology Not Elsewhere Classified | Evolutionary Biology | Fungi | Genetics | Genomics | Microbial Ecology | Microbiology | Mycology | Phylogeny and Comparative Analysis | bioinformatics | ericoid | genomics | mycorrhiza |

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