Data

FASTQ files associated with two mPAT experiments

Monash University
Martine Simonelig (Aggregated by) Paul Harrison (Aggregated by) Traude Beilharz (Aggregated by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/03/59b074beaefcc&rft.title=FASTQ files associated with two mPAT experiments&rft.identifier=https://doi.org/10.4225/03/59b074beaefcc&rft.publisher=Monash University&rft.description=The mPAT appraoch (Beilharz et al 2017; Genetics) was used to quantitate mRNA expression and poly (A)-tail length distribution changes in the early fly embryo by amplicon sequencing.fastq-files.tar.gz contains short reads from two experiments following the mPAT protocol, in FASTQ format. The reads have been subsetted to include only reads relating to the nos, pgc, and tim10 genes. Primers used to amplify these genes are listed in primers.csv, excluding the adaptor sequence component of these primers. Read counts and Reads Per Million for these genes are listed in mPAT-reads.csv.&rft.creator=Martine Simonelig&rft.creator=Martine Simonelig&rft.creator=Paul Harrison&rft.creator=Paul Harrison&rft.creator=Traude Beilharz&rft.creator=Traude Beilharz&rft.date=2017&rft_rights=CC-BY-4.0&rft_subject=mPAT&rft_subject=Characterisation of Biological Macromolecules&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Licence & Rights:

Open Licence view details
CC-BY

CC-BY-4.0

Full description

The mPAT appraoch (Beilharz et al 2017; Genetics) was used to quantitate mRNA expression and poly (A)-tail length distribution changes in the early fly embryo by amplicon sequencing.

"fastq-files.tar.gz" contains short reads from two experiments following the mPAT protocol, in FASTQ format. The reads have been subsetted to include only reads relating to the nos, pgc, and tim10 genes. Primers used to amplify these genes are listed in "primers.csv", excluding the adaptor sequence component of these primers. Read counts and Reads Per Million for these genes are listed in "mPAT-reads.csv".

Issued: 2017-11-03

Created: 2017-11-03

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Subjects
Characterisation of Biological Macromolecules | mPAT |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Identifiers
ACN 633 798 857