Data

Environmental metazoan cells (emCells) samples isolated from the Aquarium of Western Australia (AQWA), amplified using 16S teleost fish and 18S eukaryotes (universal) primers.

Commonwealth Scientific and Industrial Research Organisation
Power, Haylea ; Korbie, Darren ; O'Brien, Mitchell ; Takahashi, Miwa ; Hui, Henry ; Fuller, Kathy ; Berry, Olly ; Jarman, Simon
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25919/2xjz-3k43&rft.title=Environmental metazoan cells (emCells) samples isolated from the Aquarium of Western Australia (AQWA), amplified using 16S teleost fish and 18S eukaryotes (universal) primers.&rft.identifier=https://doi.org/10.25919/2xjz-3k43&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Raw sequencing Fastq, LCA, BLAST and ZOTU files for the metabarcoding assays used in the study, which target teleost fish, and eukaryotes (universal).\nLineage: The metabarcoding assay design, amplification and library sequencing were performed as described in Power et al. (2024). Metabarcode sequencing used an Illumina iSeq™ 100 using an i1 Reagent v2 kit&rft.creator=Power, Haylea &rft.creator=Korbie, Darren &rft.creator=O'Brien, Mitchell &rft.creator=Takahashi, Miwa &rft.creator=Hui, Henry &rft.creator=Fuller, Kathy &rft.creator=Berry, Olly &rft.creator=Jarman, Simon &rft.date=2024&rft.edition=v1&rft.coverage=115.7375,-31.8266&rft_rights=Creative Commons Attribution 4.0 International Licence https://creativecommons.org/licenses/by/4.0/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2024.&rft_subject=emCells: environmental metazoan cells&rft_subject=fluorescence-activated cell sorting (FACS)&rft_subject=FISH-FLOW&rft_subject=eDNA&rft_subject=metabarcoding&rft_subject=flow cytometry&rft_subject=single cell PCR&rft_subject=Animal cell and molecular biology&rft_subject=Zoology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Environmental assessment and monitoring&rft_subject=Environmental management&rft_subject=ENVIRONMENTAL SCIENCES&rft.type=dataset&rft.language=English Access the data
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Data is accessible online and may be reused in accordance with licence conditions

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Brief description

Raw sequencing Fastq, LCA, BLAST and ZOTU files for the metabarcoding assays used in the study, which target teleost fish, and eukaryotes (universal).
Lineage: The metabarcoding assay design, amplification and library sequencing were performed as described in Power et al. (2024). Metabarcode sequencing used an Illumina iSeq™ 100 using an i1 Reagent v2 kit

Available: 2024-08-06

Data time period: 2024-02-28 to 2024-02-28

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115.7375,-31.8266

115.7375,-31.8266

Subjects
Animal Cell and Molecular Biology | Biological Sciences | Environmental Sciences | Environmental Assessment and Monitoring | Environmental Management | FISH-FLOW | Zoology | eDNA | emCells: environmental metazoan cells | flow cytometry | fluorescence-activated cell sorting (FACS) | metabarcoding | single cell PCR |

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