Data

Effrenium voratum genomes and genes

The University of Queensland
Dr Cheong Xin Chan (Author) Ms Sarah Shah (Author) Ms Sarah Shah (Author)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.48610/1f0377a&rft.title=Effrenium voratum genomes and genes&rft.identifier=10.48610/1f0377a&rft.publisher=The University of Queensland&rft.description=This dataset contains the genome assemblies of three Effrenium voratum (NCBI:txid2562239) isolates (*.genome.fa): CCMP421, RCC1521, and rt-383, generated from a combination of short (Illumina) and long-read (PacBio, Nanopore, 10X Linked Read) sequencing technologies. Also included are their predicted genes (in coding sequences, *CDS.fa) and corresponding predicted protein sequences (*proteins.fa) in two versions: with and without (*.no_iso.*) isoforms. The gene model annotations are in GFF3 format, with (*.genome.gff3) and without isoforms (*.genes.gff3). The organellar gene model annotations and scaffolds are also included. For more details, check the README.&rft.creator=Dr Cheong Xin Chan&rft.creator=Ms Sarah Shah&rft.creator=Ms Sarah Shah&rft.date=2023&rft.type=dataset&rft.language=English Access the data
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Permitted Re-use with Acknowledgement

Contact Information

s4255161@student.uq.edu.au

Full description

This dataset contains the genome assemblies of three Effrenium voratum (NCBI:txid2562239) isolates (*.genome.fa): CCMP421, RCC1521, and rt-383, generated from a combination of short (Illumina) and long-read (PacBio, Nanopore, 10X Linked Read) sequencing technologies. Also included are their predicted genes (in coding sequences, *CDS.fa) and corresponding predicted protein sequences (*proteins.fa) in two versions: with and without (*.no_iso.*) isoforms. The gene model annotations are in GFF3 format, with (*.genome.gff3) and without isoforms (*.genes.gff3). The organellar gene model annotations and scaffolds are also included. For more details, check the README.

Issued: 2023

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