Data

Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals, Great Barrier Reef

Australian Ocean Data Network
Australian Institute of Marine Science (AIMS)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=https://apps.aims.gov.au/metadata/view/e76d8b6b-be47-46f4-8b3e-2e0bf4444693&rft.title=Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals, Great Barrier Reef&rft.identifier=https://apps.aims.gov.au/metadata/view/e76d8b6b-be47-46f4-8b3e-2e0bf4444693&rft.publisher=Australian Institute of Marine Science (AIMS)&rft.description=Measurements were carried out at the southern ends of the Pelorus and Fantome Channels (between 2 adjacent islands in the Palms Group) where the reefs are 50-150 m wide and over the sand bottom (more towards the middle of the channels).Current meters were deployed at 6 m depth (averaging 120 readings every 10th minute over 3-4 days. Relative flow was measured using plaster blocks: 2 blocks beneath each current meter, and 10 blocks across each reef perpendicular to the flow left for 24 hr (2 tidal cycles).Water samples were taken from 5-8 m depths upstream of the reefs, repeated downstream, and at the sandy sites (these at 7-10 m). Sampling was repeated 64 times in 4 sets of 5-6 days each month. September and November samples were affected by the cyanobacterium Trichodesmium. September samples were not prefiltered and standard deviations between duplicate chlorophyll samples were much higher than other months. November samples were filtered through a 10 µm mesh to remove Trichodesmium - particlate matter data therefore was Percent cover and abundances of individual taxa were assessed with 4 x 50 transects over both channel reefs. Rapid ecological assessments (REAs, 48 swims of 10-15 mins) were used for comparison of the macrobenthos and physical parameters on reef (25 REAs) and sand (23 REAs). Percent total cover of alcyoniid and other soft corals, hard corals, turf and macro algae, sand and unconsolidated rubble were estimated. Inventories of genera of soft corals, gorgonians, sponges, tunicates and zoanthids (growth forms and phyla) were complied and abundances estimated using a ranked scale (0=absent, 1=1 or few colonies, 2=uncommon, 3=moderately common, 4=common, 5=dominant). The standing crop of soft corals was assesed by measuring the projected areas and colony volumes of individuals in each of the 6 most common soft coral genera. Soft coral biomass per m2 was estimated by collecting 15 specimens each of the 2 dominant soft coral species (Sinularia flexibilis and S. capitalis) after measuring their projected areas and height. These were then dried to constant weight ashed and then the ash-free weight determined (the relationship between the AFDW and colony area was linear in both taxa).Concentrations of phytoplankton pigments and suspended particulate nutrients were measured (in µg 1-1). Net removal of chlorophyll (as a marker for phytoplankton), particulate organic carbon (for determining energy gain), and particulate phosphorus and nitrogen were estimated. To investigate the rates of in situ depletion of natural suspended particulate matter (containing living and non-living particles) by reef communities dominated by zooxanthellate alcyoniid soft corals. Soft coral genera: Alcyonium, Anthelia, Cladiella, Dendronephthya, Dicotella, Efflatounaria, Ellisella, Isis hippuris, Junceella, Lobophyton, Melathaea, Nephthea, Paralemnalia, Parerythropodium, Plexauridae, Sarcophyton, Scleronephthya, Sinularia, Xenia.The most common soft coral taxa (in order of percent cover) were: Sinularia flexibilis S. capitalis, Sinularia spp. Sarcophyton spp, Nephthea spp, Lobophyton spp.Few other cryptic filter feeders were found and total cover of epibenthic sponges, bivalves and tunicates amounted to Maintenance and Update Frequency: asNeeded&rft.creator=Australian Institute of Marine Science (AIMS) &rft.date=2024&rft.coverage=westlimit=146.4997; southlimit=-18.67; eastlimit=146.4997; northlimit=-18.57&rft.coverage=westlimit=146.4997; southlimit=-18.67; eastlimit=146.4997; northlimit=-18.57&rft_rights= http://creativecommons.org/licenses/by-nc/3.0/au/&rft_rights=http://i.creativecommons.org/l/by-nc/3.0/au/88x31.png&rft_rights=WWW:LINK-1.0-http--related&rft_rights=License Graphic&rft_rights=Creative Commons Attribution-NonCommercial 3.0 Australia License&rft_rights=http://creativecommons.org/international/au/&rft_rights=WWW:LINK-1.0-http--related&rft_rights=WWW:LINK-1.0-http--related&rft_rights=License Text&rft_rights=Use Limitation: All AIMS data, products and services are provided as is and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2009). Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals, Great Barrier Reef. https://apps.aims.gov.au/metadata/view/e76d8b6b-be47-46f4-8b3e-2e0bf4444693, accessed[date-of-access].&rft_rights=Resource Usage:Use of the AIMS data is for not-for-profit applications only. All other users shall seek permission for use by contacting AIMS. Acknowledgements as prescribed must be clearly set out in the user's formal communications or publications.Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassifiedMetadata Usage:Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassified&rft_rights=Creative Commons Attribution-NonCommercial 3.0 Australia License http://creativecommons.org/licenses/by-nc/3.0/au&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data

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Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2009). Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals, Great Barrier Reef. https://apps.aims.gov.au/metadata/view/e76d8b6b-be47-46f4-8b3e-2e0bf4444693, accessed[date-of-access]".

Resource Usage:Use of the AIMS data is for not-for-profit applications only. All other users shall seek permission for use by contacting AIMS. Acknowledgements as prescribed must be clearly set out in the user's formal communications or publications.Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassifiedMetadata Usage:Access Constraint: intellectualPropertyRightsUse Constraint: intellectualPropertyRightsSecurity classification code: unclassified

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Brief description

Measurements were carried out at the southern ends of the Pelorus and Fantome Channels (between 2 adjacent islands in the Palms Group) where the reefs are 50-150 m wide and over the sand bottom (more towards the middle of the channels).Current meters were deployed at 6 m depth (averaging 120 readings every 10th minute over 3-4 days. Relative flow was measured using plaster blocks: 2 blocks beneath each current meter, and 10 blocks across each reef perpendicular to the flow left for 24 hr (2 tidal cycles).Water samples were taken from 5-8 m depths upstream of the reefs, repeated downstream, and at the sandy sites (these at 7-10 m). Sampling was repeated 64 times in 4 sets of 5-6 days each month. September and November samples were affected by the cyanobacterium Trichodesmium. September samples were not prefiltered and standard deviations between duplicate chlorophyll samples were much higher than other months. November samples were filtered through a 10 µm mesh to remove Trichodesmium - particlate matter data therefore was Percent cover and abundances of individual taxa were assessed with 4 x 50 transects over both channel reefs. Rapid ecological assessments (REAs, 48 swims of 10-15 mins) were used for comparison of the macrobenthos and physical parameters on reef (25 REAs) and sand (23 REAs). Percent total cover of alcyoniid and other soft corals, hard corals, turf and macro algae, sand and unconsolidated rubble were estimated. Inventories of genera of soft corals, gorgonians, sponges, tunicates and zoanthids (growth forms and phyla) were complied and abundances estimated using a ranked scale (0=absent, 1=1 or few colonies, 2=uncommon, 3=moderately common, 4=common, 5=dominant). The standing crop of soft corals was assesed by measuring the projected areas and colony volumes of individuals in each of the 6 most common soft coral genera. Soft coral biomass per m2 was estimated by collecting 15 specimens each of the 2 dominant soft coral species (Sinularia flexibilis and S. capitalis) after measuring their projected areas and height. These were then dried to constant weight ashed and then the ash-free weight determined (the relationship between the AFDW and colony area was linear in both taxa).Concentrations of phytoplankton pigments and suspended particulate nutrients were measured (in µg 1-1). Net removal of chlorophyll (as a marker for phytoplankton), particulate organic carbon (for determining energy gain), and particulate phosphorus and nitrogen were estimated. To investigate the rates of in situ depletion of natural suspended particulate matter (containing living and non-living particles) by reef communities dominated by zooxanthellate alcyoniid soft corals. Soft coral genera: Alcyonium, Anthelia, Cladiella, Dendronephthya, Dicotella, Efflatounaria, Ellisella, Isis hippuris, Junceella, Lobophyton, Melathaea, Nephthea, Paralemnalia, Parerythropodium, Plexauridae, Sarcophyton, Scleronephthya, Sinularia, Xenia.The most common soft coral taxa (in order of percent cover) were: Sinularia flexibilis S. capitalis, Sinularia spp. Sarcophyton spp, Nephthea spp, Lobophyton spp.Few other cryptic filter feeders were found and total cover of epibenthic sponges, bivalves and tunicates amounted to <1%.

Lineage

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Notes

Credit
Fabricius, Katharina E, Dr (Principal Investigator)

Modified: 10 08 2024

This dataset is part of a larger collection

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146.4997,-18.67 146.4997,-18.57

146.4997,-18.62

text: westlimit=146.4997; southlimit=-18.67; eastlimit=146.4997; northlimit=-18.57

Subjects
oceans |

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Other Information
Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals: Fabricius KE and Dommisse M (2000) Depletion of suspended particulate matter over coastal reef communities dominated by zooxanthellate soft corals. Marine Ecology Progress Series 196: 157-167.

local : articleId=1336

Identifiers
  • global : e76d8b6b-be47-46f4-8b3e-2e0bf4444693