Data

Data to support TCRa and TCRb repertoire analysis of human thymocyte subsets (samples fk_167, fk_168 and fk_172)

Monash University
Stephen Daley (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.26180/5c484681591c0&rft.title=Data to support TCRa and TCRb repertoire analysis of human thymocyte subsets (samples fk_167, fk_168 and fk_172)&rft.identifier=https://doi.org/10.26180/5c484681591c0&rft.publisher=Monash University&rft.description=The file contains human T cell receptor (TCR) sequences obtained by multiplex PCR amplification of cDNA molecules followed by Illumina sequencing. Sequences were aligned to the human genome using MIGEC software (see doi: 10.1038/nmeth.2960 for details). Except for the header row, each row contains information about a unique TCR nucleotide sequence. Column 1 stores the TCR chain (a, alpha; b, beta). Column 2 stores the T cell subset. Column 3 is an identifier for the thymus sample of origin. Columns 4 and 5 store the nucleotide sequence and amino acid sequence, respectively, of the complementarity-determining region 3 (CDR3). Columns 6 and 7 store the TCR variable (v) and joining (j) gene segment information.&rft.creator=Stephen Daley&rft.creator=Stephen Daley&rft.date=2019&rft_rights=CC0&rft_subject=TCR repertoire, TCR sequencing, TCR sequence, T cell, Thymus, Immunology&rft_subject=Immunology&rft.type=dataset&rft.language=English Access the data
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The file contains human T cell receptor (TCR) sequences obtained by multiplex PCR amplification of cDNA molecules followed by Illumina sequencing. Sequences were aligned to the human genome using MIGEC software (see doi: 10.1038/nmeth.2960 for details). Except for the header row, each row contains information about a unique TCR nucleotide sequence. Column 1 stores the TCR chain (a, alpha; b, beta). Column 2 stores the T cell subset. Column 3 is an identifier for the thymus sample of origin. Columns 4 and 5 store the nucleotide sequence and amino acid sequence, respectively, of the complementarity-determining region 3 (CDR3). Columns 6 and 7 store the TCR variable (v) and joining (j) gene segment information.

Issued: 2019-01-23

Created: 2019-01-23

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Subjects
Immunology | TCR repertoire, TCR sequencing, TCR sequence, T cell, Thymus, Immunology |

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Identifiers
ACN 633 798 857