Data

Data for: Adaptive tails? parallel evolution of expanded tails in monsoonal tropics lineages of an Australian gecko radiation ( Oedura )

Adelaide University
Green, Amy ; Oliver, Paul ; Gray, Jaimi ; Sherratt, Emma
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25909/23487380.v1&rft.title=Data for: Adaptive tails? parallel evolution of expanded tails in monsoonal tropics lineages of an Australian gecko radiation ( Oedura )&rft.identifier=10.25909/23487380.v1&rft.publisher=The University of Adelaide&rft.description=Files included here are:R script of analyses for paper Oedura_3D_analysis.R, including all analyses and code for figuresR script to calculate Surface Area and Volume of tails from 3D meshes (.ply files) SAV.RR script demonstrating tail straightening functions for coordinate data and meshes Straightening tails.RR source file of tail straightening functions for coordinate data and meshes Straightening tails source.RZip folder of .ply files made from 3D structured light surface scanningZip folder of .txt files [Morphologika format] of landmark coordinate data collected in Stratovan Checkpoint on .ply filesFiles for analysis with Oedura_3D_analysis.R: classifier specimens.csv conttains information about every specimen; ExternalData.csv are caliper measurements from museum specimens; Oedura Tail SA V.csv Surface Area and Volume for each specimen, calculated from SAV.R; classifier species.csv species-level ecological data; diplodactyloidea.tree phylogenetic tree file.Details of methods are in adjoining paper&rft.creator=Green, Amy &rft.creator=Oliver, Paul &rft.creator=Gray, Jaimi &rft.creator=Sherratt, Emma &rft.edition=1&rft_rights= https://creativecommons.org/licenses/by/4.0/&rft_subject=Biological adaptation&rft_subject=Evolutionary ecology&rft_subject=Australia&rft_subject=caudal&rft_subject=Gekkota&rft_subject=geometric morphometrics&rft_subject=reptiles&rft_subject=retrodeformation&rft.type=dataset&rft.language=English Access the data
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Files included here are:

  • R script of analyses for paper "Oedura_3D_analysis.R", including all analyses and code for figures
  • R script to calculate Surface Area and Volume of tails from 3D meshes (.ply files) "SAV.R"
  • R script demonstrating tail straightening functions for coordinate data and meshes "Straightening tails.R"
  • R source file of tail straightening functions for coordinate data and meshes "Straightening tails source.R"
  • Zip folder of .ply files made from 3D structured light surface scanning
  • Zip folder of .txt files [Morphologika format] of landmark coordinate data collected in Stratovan Checkpoint on .ply files
  • Files for analysis with "Oedura_3D_analysis.R": "classifier specimens.csv" conttains information about every specimen; "ExternalData.csv" are caliper measurements from museum specimens; "Oedura Tail SA V.csv" Surface Area and Volume for each specimen, calculated from "SAV.R"; " classifier species.csv" species-level ecological data; "diplodactyloidea.tree" phylogenetic tree file.


Details of methods are in adjoining paper

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Subjects
Australia | Biological adaptation | Evolutionary ecology | Gekkota | caudal | geometric morphometrics | reptiles | retrodeformation |

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Identifiers
ACN 633 798 857