Data

Cowpea genome and transcriptome data resource

Commonwealth Scientific and Industrial Research Organisation
Spriggs, Andrew ; Henderson, Steven ; Taylor, Jen ; Koltunow, Anna
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/08/5b1723666d6a5&rft.title=Cowpea genome and transcriptome data resource&rft.identifier=https://doi.org/10.4225/08/5b1723666d6a5&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Assembled genomic and tissue-specific transcriptomic data resources for two genetically distinct lines of Cowpea (Vigna unguiculata (L.) Walp). For each of two varieties of cowpea (IT97K-499-35, IT86D-1010) this collections contains the following datasets :\n\ni) genomic survey assemblies based on Illumina sequencing\nii) transcriptome assemblies\niii) raw DNA and RNA sequence data feeding into the above assemblies\niv) In-silico gene predictions and predicted gene sequences derived from IT86D-1010 and IT97K-499-35\nv) Mapping to the Vigna unguiculata v1.0 reference genome (http://phytozome.jgi.doe.gov/)\n&rft.creator=Spriggs, Andrew &rft.creator=Henderson, Steven &rft.creator=Taylor, Jen &rft.creator=Koltunow, Anna &rft.date=2018&rft.edition=v3&rft_rights=Creative Commons Attribution 4.0 International Licence https://creativecommons.org/licenses/by/4.0/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2017.&rft_subject=cowpea&rft_subject=genome&rft_subject=transcriptome&rft_subject=male and female gametogenesis&rft_subject=seed&rft_subject=Genomics&rft_subject=Genetics&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Plant developmental and reproductive biology&rft_subject=Plant biology&rft.type=dataset&rft.language=English Access the data
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Creative Commons Attribution 4.0 International Licence
https://creativecommons.org/licenses/by/4.0/

Data is accessible online and may be reused in accordance with licence conditions

All Rights (including copyright) CSIRO 2017.

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Brief description

Assembled genomic and tissue-specific transcriptomic data resources for two genetically distinct lines of Cowpea (Vigna unguiculata (L.) Walp). For each of two varieties of cowpea (IT97K-499-35, IT86D-1010) this collections contains the following datasets :

i) genomic survey assemblies based on Illumina sequencing
ii) transcriptome assemblies
iii) raw DNA and RNA sequence data feeding into the above assemblies
iv) In-silico gene predictions and predicted gene sequences derived from IT86D-1010 and IT97K-499-35
v) Mapping to the Vigna unguiculata v1.0 reference genome (http://phytozome.jgi.doe.gov/)

Available: 2018-06-06

This dataset is part of a larger collection

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Biological Sciences | Genetics | Genomics | Plant Biology | Plant Developmental and Reproductive Biology | cowpea | genome | male and female gametogenesis | seed | transcriptome |

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